RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 BMP8BP34820 402 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 PEX5P50542 639 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 ROR1Q01973 937 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 TMC7Q7Z402 723 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 PIGZQ86VD9 579 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 TDHQ8IZJ6 230 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 UBL4BQ8N7F7 174 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 ZMIZ2Q8NF64 920 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 KRT12Q99456 494 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 PLEKHA4Q9H4M7 779 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 CERS4Q9HA82 394 aa19.43■□□□□ 0.7
SMPD1-208ENST00000533123 WDR27A2RRH5 827 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 E5RJQ4 531 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 C5orf67F2Z3F1 127 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 MYO1FO00160 1098 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 FGGP02679 453 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 ERBB2P04626 1255 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 CTSAP10619 480 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 DNAJB1P25685 340 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 CTNNA1P35221 906 aaKnown RBP19.42■□□□□ 0.7
SMPD1-208ENST00000533123 PLA2G4AP47712 749 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 ERVFC1P60507 584 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 RPL7AP62424 266 aaKnown RBP19.42■□□□□ 0.7
SMPD1-208ENST00000533123 TERF2Q15554 542 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 PPP1R2P3Q6NXS1 205 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 TMCO3Q6UWJ1 677 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 KLHL7Q8IXQ5 586 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 SPPL3Q8TCT6 385 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 POF1BQ8WVV4 589 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 C18orf8Q96DM3 657 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 TGS1Q96RS0 853 aaKnown RBP19.42■□□□□ 0.7
SMPD1-208ENST00000533123 MRPL47Q9HD33 250 aaKnown RBP19.42■□□□□ 0.7
SMPD1-208ENST00000533123 STK39Q9UEW8 545 aa19.42■□□□□ 0.7
SMPD1-208ENST00000533123 DMGDHQ9UI17 866 aaKnown RBP19.42■□□□□ 0.7
SMPD1-208ENST00000533123 TARSL2A2RTX5 802 aaKnown RBP19.41■□□□□ 0.7
SMPD1-208ENST00000533123 CCDC151A5D8V7 595 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 XPO1O14980 1071 aaKnown RBP19.41■□□□□ 0.7
SMPD1-208ENST00000533123 GABBR2O75899 941 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 CALB1P05937 261 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 BRD3Q15059 726 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 C8orf74Q6P047 294 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 WDR93Q6P2C0 686 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 ADAT2Q7Z6V5 191 aaKnown RBP19.41■□□□□ 0.7
SMPD1-208ENST00000533123 TTC9BQ8N6N2 239 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 STK32AQ8WU08 396 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 TCF25Q9BQ70 676 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 SLC4A5Q9BY07 1137 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 NKX2-4Q9H2Z4 354 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 PARVAQ9NVD7 372 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 PCDHB5Q9Y5E4 795 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 SCINQ9Y6U3 715 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 PTPRDP23468 1912 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 TCRBV5S1A1TA0A578 114 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 MTMR11A4FU01 709 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 LILRB3O75022 631 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 VNN2O95498 520 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 KCTD19Q17RG1 926 aaPredicted RBP19.41■□□□□ 0.7
SMPD1-208ENST00000533123 CRISPLD1Q9H336 500 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 CSNK1G1Q9HCP0 422 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 SLC27A5Q9Y2P5 690 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 NR2E1Q9Y466 385 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 MYO9BQ13459 2157 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 TRANK1O15050 2925 aa19.41■□□□□ 0.7
SMPD1-208ENST00000533123 F8VP50 259 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 KRIT1O00522 736 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 CXCL14O95715 111 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 RB1P06400 928 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 LCP1P13796 627 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 GRIK1P39086 918 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 ADCY1Q08828 1119 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 CHRDL2Q6WN34 429 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 TMEM110Q86TL2 294 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 SCUBE3Q8IX30 993 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 IPO4Q8TEX9 1081 aaKnown RBP19.4■□□□□ 0.7
SMPD1-208ENST00000533123 FUBP3Q96I24 572 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMPD1-208ENST00000533123 C11orf84Q9BUA3 381 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-208ENST00000533123 DMAP1Q9NPF5 467 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-208ENST00000533123 MSRAQ9UJ68 235 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 LZTS1Q9Y250 596 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 PCDHA3Q9Y5H8 950 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 GRM6O15303 877 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 PYGMP11217 842 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 CTNNA2P26232 953 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 GABRB2P47870 512 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 ERVK-21P61565 698 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 DUSP4Q13115 394 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 LONRF2Q1L5Z9 754 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 DNAJC24Q6P3W2 148 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 XYLT1Q86Y38 959 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 SCN4BQ8IWT1 228 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 GSPT2Q8IYD1 628 aaKnown RBP19.4■□□□□ 0.7
SMPD1-208ENST00000533123 FEZF2Q8TBJ5 459 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 HSFY1Q96LI6 401 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 MCEEQ96PE7 176 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 MIS12Q9H081 205 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 ENTPD7Q9NQZ7 604 aa19.4■□□□□ 0.7
SMPD1-208ENST00000533123 TTC7AQ9ULT0 858 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-208ENST00000533123 CCDC66A2RUB6 948 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 TEX28O15482 410 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 PROSCO94903 275 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms