RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 DLATP10515 647 aaKnown RBP13.87□□□□□ -0.19
COPB1-209ENST00000533096 PFKLP17858 780 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 GABRG2P18507 467 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 TNNI1P19237 187 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 MAOBP27338 520 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 YWHAQP27348 245 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 TRIP6Q15654 476 aaKnown RBP13.87□□□□□ -0.19
COPB1-209ENST00000533096 HSF5Q4G112 596 aaPredicted RBP13.87□□□□□ -0.19
COPB1-209ENST00000533096 SLC36A4Q6YBV0 504 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 NUDT18Q6ZVK8 323 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 TMEM25Q86YD3 366 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 CBWD2Q8IUF1 395 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 NUP93Q8N1F7 819 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 TRIML1Q8N9V2 468 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 CCDC127Q96BQ5 260 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 KCNK16Q96T55 309 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 MED10Q9BTT4 135 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 TTLL2Q9BWV7 592 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 ZNF518BQ9C0D4 1074 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 DPEP3Q9H4B8 488 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 NXF1Q9UBU9 619 aaKnown RBP13.87□□□□□ -0.19
COPB1-209ENST00000533096 CYP8B1Q9UNU6 501 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 NME7Q9Y5B8 376 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 PTPRJQ12913 1337 aa13.87□□□□□ -0.19
COPB1-209ENST00000533096 KIF26AQ9ULI4 1882 aaPredicted RBP13.87□□□□□ -0.19
COPB1-209ENST00000533096 A8MXQ7 604 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 H0Y626 953 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 ARHGAP33O14559 1287 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 COCHO43405 550 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 NDUFS2O75306 463 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 TULP3O75386 442 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 TRIM16O95361 564 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 CD59P13987 128 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 HOXB2P14652 356 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 EIF2DP41214 584 aaKnown RBP13.86□□□□□ -0.19
COPB1-209ENST00000533096 DPP6P42658 865 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 NOP14P78316 857 aaKnown RBP13.86□□□□□ -0.19
COPB1-209ENST00000533096 SCAPQ12770 1279 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 PLEKHG6Q3KR16 790 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 WDR72Q3MJ13 1102 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 SPDYCQ5MJ68 293 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 HECTD3Q5T447 861 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 TRAPPC11Q7Z392 1133 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 DDX42Q86XP3 938 aaKnown RBP eCLIP13.86□□□□□ -0.192e-15■■■■■ 26.8
COPB1-209ENST00000533096 BBS7Q8IWZ6 715 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 CHPFQ8IZ52 775 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 SCAMP5Q8TAC9 235 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 HPS3Q969F9 1004 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 FBXO32Q969P5 355 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 WBP2Q969T9 261 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 HSPA12BQ96MM6 686 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 ACOX2Q99424 681 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 B3GNT5Q9BYG0 378 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 SLC6A17Q9H1V8 727 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 CALCOCO1Q9P1Z2 691 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 STK17AQ9UEE5 414 aa13.86□□□□□ -0.19
COPB1-209ENST00000533096 E2F8A0AVK6 867 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 VPS37CA5D8V6 355 aaPredicted RBP13.85□□□□□ -0.19
COPB1-209ENST00000533096 OAS1P00973 400 aaKnown RBP13.85□□□□□ -0.19
COPB1-209ENST00000533096 SYPP08247 313 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 NTSR1P30989 418 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 TXLNAP40222 546 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 TRPC3Q13507 836 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 SURF1Q15526 300 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 TPGS1Q6ZTW0 290 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 LIMS2Q7Z4I7 341 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 MIB1Q86YT6 1006 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 SLC41A1Q8IVJ1 513 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 CCSER2Q9H7U1 834 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 SPHK2Q9NRA0 654 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 TMEM30AQ9NV96 361 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 RAD54BQ9Y620 910 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 GREB1Q4ZG55 1949 aa13.85□□□□□ -0.19
COPB1-209ENST00000533096 NUP210Q8TEM1 1887 aaPredicted RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 FRYQ5TBA9 3013 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 PHACTR2O75167 634 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 CD2BP2O95400 341 aaKnown RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 OLFM2O95897 454 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 CHRM1P11229 460 aaPredicted RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 STAT6P42226 847 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 CDH8P55286 799 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 TNNC1P63316 161 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 RABEP1Q15276 862 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 PREPLQ4J6C6 727 aaPredicted RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 EGFLAMQ63HQ2 1017 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 GRAMD4Q6IC98 578 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 FAM173BQ6P4H8 233 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 KIAA1324Q6UXG2 1013 aaKnown RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 TRMT11Q7Z4G4 463 aaKnown RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 BRAPQ7Z569 592 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 PHTF2Q8N3S3 785 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 PDILTQ8N807 584 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 HNRNPLLQ8WVV9 542 aaKnown RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 BHMTQ93088 406 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 ELMO3Q96BJ8 720 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 CEP295NLQ96MC4 621 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 CAPN10Q9HC96 672 aa13.84□□□□□ -0.19
COPB1-209ENST00000533096 DNAJC17Q9NVM6 304 aaKnown RBP13.84□□□□□ -0.19
COPB1-209ENST00000533096 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms