RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SMARCD1Q96GM5 515 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM81BQ96LP2 452 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM83CQ9BQN1 747 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 MED10Q9BTT4 135 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 NT5C1AQ9BXI3 368 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 CSNK1G1Q9HCP0 422 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM207AQ9NSI2 230 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 TMEM30AQ9NV96 361 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 APEX2Q9UBZ4 518 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 MTF2Q9Y483 593 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 PIAS3Q9Y6X2 628 aa13.7□□□□□ -0.22
TRAPPC4-212ENST00000533058 WDFY4Q6ZS81 3184 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 TRAV19A0A0A6YYK7 116 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 PROB1E7EW31 1015 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 H0Y858 1186 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 CLDN5O00501 218 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 TNFRSF10BO14763 440 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 CBFA2T2O43439 604 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 CILPO75339 1184 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 OLFM2O95897 454 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 DCNP07585 359 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 KLK7P49862 253 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 CACNA2D1P54289 1103 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 GCNT1Q02742 428 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 KCNMA1Q12791 1236 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 UBXN2BQ14CS0 331 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 ANGPT1Q15389 498 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 SNX30Q5VWJ9 437 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 TMEM270Q6UE05 265 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 ENOSF1Q7L5Y1 443 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 RALGPS2Q86X27 583 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 C1orf210Q8IVY1 113 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 PDZD8Q8NEN9 1154 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 WHAMMQ8TF30 809 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM3CQ92520 227 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 HEXIM2Q96MH2 286 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 NAP1L5Q96NT1 182 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 SLITRK1Q96PX8 696 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 HNRNPABQ99729 332 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 IER2Q9BTL4 223 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 DMAP1Q9NPF5 467 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
TRAPPC4-212ENST00000533058 NUP210Q8TEM1 1887 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 A0A1B0GTH6 734 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 TEX33O43247 280 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 CD19P15391 556 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 HDCP19113 662 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 CD72P21854 359 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 NBL1P41271 181 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 TAF10Q12962 218 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 KLHDC7AQ5VTJ3 777 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 GAS2L3Q86XJ1 694 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 GPIHBP1Q8IV16 184 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 SLC22A12Q96S37 553 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 KCNK16Q96T55 309 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 SMG9Q9H0W8 520 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 PNPLA8Q9NP80 782 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 SIX2Q9NPC8 291 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 CCL26Q9Y258 94 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 PTPRDP23468 1912 aa13.68□□□□□ -0.22
TRAPPC4-212ENST00000533058 C2orf78A6NCI8 922 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 AP1G2O75843 785 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 OAS1P00973 400 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 YWHAQP27348 245 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 ADORA2BP29275 332 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 POLR2FP61218 127 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 SLC7A9P82251 487 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 USP4Q13107 963 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 PDGFRLQ15198 375 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 ZNF77Q15935 545 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 ITPRIPL2Q3MIP1 535 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 RBBP8NLQ8NC74 664 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 ZMIZ2Q8NF64 920 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 SLC2A14Q8TDB8 520 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 TMEM176AQ96HP8 235 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 KREMEN1Q96MU8 473 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 ERGIC2Q96RQ1 377 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 CYP2S1Q96SQ9 504 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 SMOQ99835 787 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 TRPC7Q9HCX4 862 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 PLCB1Q9NQ66 1216 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 GKN1Q9NS71 199 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 KRT82Q9NSB4 513 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 FBXO4Q9UKT5 387 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 SIK3Q9Y2K2 1263 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 FHOD1Q9Y613 1164 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 COL4A2P08572 1712 aa13.67□□□□□ -0.22
TRAPPC4-212ENST00000533058 DENND4CQ5VZ89 1909 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms