RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 CDH6P55285 790 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 RBP5P82980 135 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 ROR1Q01973 937 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 R3HDM1Q15032 1099 aaKnown RBP8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 MARCH8Q5T0T0 291 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 SLC9A4Q6AI14 798 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 LVRNQ6Q4G3 990 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 MTHFD1LQ6UB35 978 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 CHRDL2Q6WN34 429 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 TTC30AQ86WT1 665 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 VSIG1Q86XK7 387 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 PDIK1LQ8N165 341 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 AFG1LQ8WV93 481 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 UTP4Q969X6 686 aaKnown RBP8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 OPTNQ96CV9 577 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 CDCA5Q96FF9 252 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 PPP1R16BQ96T49 567 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 SLC4A5Q9BY07 1137 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 MYLK2Q9H1R3 596 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 CXCL16Q9H2A7 254 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 PLAC1Q9HBJ0 212 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 PNPLA8Q9NP80 782 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 DPP3Q9NY33 737 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 USH1CQ9Y6N9 552 aa8.66□□□□□ -1.02
TRIM53BP-201ENST00000532912 TRIP11Q15643 1979 aa8.65□□□□□ -1.02
TRIM53BP-201ENST00000532912 PLXNB2O15031 1838 aa8.65□□□□□ -1.02
TRIM53BP-201ENST00000532912 TCRBV9S1A1TA0A576 114 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 PIAS1O75925 651 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 PDGFRAP16234 1089 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 ADRA1DP25100 572 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 GRM5P41594 1212 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 ELK3P41970 407 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 ETV4P43268 484 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 NEK3P51956 506 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 BASP1P80723 227 aaKnown RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 SLC18A2Q05940 514 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 STILQ15468 1287 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 GOLGA7BQ2TAP0 167 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 BBS9Q3SYG4 887 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 SPDYAQ5MJ70 313 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 PMF1Q6P1K2 205 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 FASTKD5Q7L8L6 764 aaKnown RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 OTOAQ7RTW8 1153 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 TMEM110Q86TL2 294 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 KIF2BQ8N4N8 673 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 TTC39CQ8N584 583 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 C12orf29Q8N999 325 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 TEKT4Q8WW24 435 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 SLC44A1Q8WWI5 657 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 ZNF75CPQ92670 426 aaPredicted RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 ALKBH8Q96BT7 664 aaKnown RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 KLHL29Q96CT2 875 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 MRRFQ96E11 262 aaKnown RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 ACAP3Q96P50 834 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 PAIP2Q9BPZ3 127 aaKnown RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 C11orf84Q9BUA3 381 aaPredicted RBP8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 NT5C1AQ9BXI3 368 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 CALN1Q9BXU9 219 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 PCDH18Q9HCL0 1135 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 VTA1Q9NP79 307 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 KANSL3Q9P2N6 904 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 TRIM33Q9UPN9 1127 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 CHMP2BQ9UQN3 213 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 AKT3Q9Y243 479 aa8.65□□□□□ -1.03
TRIM53BP-201ENST00000532912 BCLAF3A2AJT9 711 aaKnown RBP8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 ZNF487B1APH4 448 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 KBTBD13C9JR72 458 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 PIK3R2O00459 728 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 PPEF2O14830 753 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 MDM4O15151 490 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 TM9SF1O15321 606 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 ZNF286BP0CG31 522 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 SETSIPP0DME0 302 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 T-ENOLP0DO92 83 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 TGM2P21980 687 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 HOXA11P31270 313 aaPredicted RBP8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 SLC8A1P32418 973 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 RPL34P49207 117 aaKnown RBP8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 MTM1Q13496 603 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 TFDP2Q14188 446 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 PDK2Q15119 407 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 ZBTB6Q15916 424 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 CA9Q16790 459 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 BOLA3Q53S33 107 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 PLEKHG4Q58EX7 1191 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 OR6B2Q6IFH4 312 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 ZC3H18Q86VM9 953 aaKnown RBP8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 TAB3Q8N5C8 712 aaPredicted RBP8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 PCDH19Q8TAB3 1148 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 ZNF398Q8TD17 642 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 TCP10LQ8TDR4 215 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 LRRC8CQ8TDW0 803 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 SLC35F5Q8WV83 523 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 ERP27Q96DN0 273 aa8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 L3MBTL3Q96JM7 780 aaPredicted RBP8.64□□□□□ -1.03
TRIM53BP-201ENST00000532912 SERAC1Q96JX3 654 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms