RNA–Protein interactions for RNA: ENST00000532838.1

CKLF-CMTM1-204, Transcript of CKLF-CMTM1 readthrough, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF-CMTM1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-204ENST00000532838 PATJQ8NI35 1801 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 FAM92AA1XBS5 289 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 MED7O43513 233 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 OAS1P00973 400 aaKnown RBP21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SETSIPP0DME0 302 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SLC9A1P19634 815 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CDK11BP21127 795 aaKnown RBP21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 USP8P40818 1118 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 IFNAR2P48551 515 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 VCPP55072 806 aaKnown RBP21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 MLLT6P55198 1093 aaPredicted RBP21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SLC7A9P82251 487 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TYRO3Q06418 890 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 GOLGA8FQ08AF8 430 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 GOLGA8DPQ0D2H9 430 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 PDGFRLQ15198 375 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ITPRIPL2Q3MIP1 535 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SNX30Q5VWJ9 437 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CWF19L1Q69YN2 538 aaKnown RBP21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ARHGAP18Q8N392 663 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SH3RF2Q8TEC5 729 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 KAT5Q92993 513 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 EXOC4Q96A65 974 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SLC22A12Q96S37 553 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 GKN1Q9NS71 199 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 MYO16Q9Y6X6 1858 aa21.3■■□□□ 1
CKLF-CMTM1-204ENST00000532838 XPO1O14980 1071 aaKnown RBP21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 PON1P27169 355 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 KIF11P52732 1056 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 KLHL40Q2TBA0 621 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 FKBP15Q5T1M5 1219 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 C11orf57Q6ZUT1 292 aaPredicted RBP21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 PIGZQ86VD9 579 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ZFYVE19Q96K21 471 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CDK5RAP1Q96SZ6 601 aaKnown RBP21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 DUS2Q9NX74 493 aaKnown RBP21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TICRRQ7Z2Z1 1910 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ZDBF2Q9HCK1 2354 aa21.29■■□□□ 1
CKLF-CMTM1-204ENST00000532838 HHLA1C9JL84 531 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 M0QYV0 167 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 O00370 1275 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SLC9A3R1O14745 358 aaPredicted RBP21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CYP26A1O43174 497 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TLR5O60602 858 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 RALAP11233 206 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TCF3P15923 654 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 USP4Q13107 963 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 NR1H3Q13133 447 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ZNF77Q15935 545 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CNGA2Q16280 664 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ARHGAP44Q17R89 818 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SMYD5Q6GMV2 418 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 LCLAT1Q6UWP7 414 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 GPRIN1Q7Z2K8 1008 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CCDC186Q7Z3E2 898 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SIX6OS1Q8N1H7 587 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CPA6Q8N4T0 437 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TMEM105Q8N8V8 129 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 PJA1Q8NG27 643 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 FAM3CQ92520 227 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ATP2A3Q93084 1043 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 KREMEN1Q96MU8 473 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 LRRC3BQ96PB8 259 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 DDX23Q9BUQ8 820 aaKnown RBP21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 OSBPL6Q9BZF3 934 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 FANCLQ9NW38 375 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 NAGPAQ9UK23 515 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ARIH1Q9Y4X5 557 aaPredicted RBP21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CPQQ9Y646 472 aa21.28■■□□□ 1
CKLF-CMTM1-204ENST00000532838 HELZP42694 1942 aaKnown RBP21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 FAM170BA6NMN3 283 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 LEFTY2O00292 366 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 OLFM2O95897 454 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ZDHHC11BP0C7U3 371 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 ATP5C1P36542 298 aaKnown RBP21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 MAGEA9P43362 315 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TKTL1P51854 596 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 PDE4CQ08493 712 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 RUNX3Q13761 415 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 MIIPQ5JXC2 388 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TTC30AQ86WT1 665 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 RALGPS2Q86X27 583 aaPredicted RBP21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 KIAA1958Q8N8K9 716 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 UBA3Q8TBC4 463 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 OSCP1Q8WVF1 389 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 FOXQ1Q9C009 403 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 RNF38Q9H0F5 515 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 IRF2BPLQ9H1B7 796 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 CCSER2Q9H7U1 834 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 LTB4R2Q9NPC1 389 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SMPD4Q9NXE4 827 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 TAB2Q9NYJ8 693 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 GTSE1Q9NYZ3 720 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SH3BP1Q9Y3L3 701 aa21.27■■□□□ 1
CKLF-CMTM1-204ENST00000532838 SMTNL1A8MU46 457 aa21.26■□□□□ 0.99
CKLF-CMTM1-204ENST00000532838 ARNTLO00327 626 aa21.26■□□□□ 0.99
CKLF-CMTM1-204ENST00000532838 COCHO43405 550 aa21.26■□□□□ 0.99
CKLF-CMTM1-204ENST00000532838 CD72P21854 359 aa21.26■□□□□ 0.99
CKLF-CMTM1-204ENST00000532838 BRD2P25440 801 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms