RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 CGNQ9P2M7 1197 aaKnown RBP18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 SERTAD1Q9UHV2 236 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 MMP17Q9ULZ9 603 aa18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 MAP1BP46821 2468 aaKnown RBP18.15■□□□□ 0.5
RPUSD4-207ENST00000532800 MYH10P35580 1976 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 COCHO43405 550 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 RHOBTB1O94844 696 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 VNN1O95497 513 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 BCKDHBP21953 392 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 SLC5A3P53794 718 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 DLG4P78352 724 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 STK4Q13043 487 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 NCOA4Q13772 614 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 ZNF667Q5HYK9 610 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 RHBDF2Q6PJF5 856 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 TMEM92Q6UXU6 159 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 RASSF3Q86WH2 238 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 KIAA1958Q8N8K9 716 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 DDX1Q92499 740 aaKnown RBP18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 ZDHHC4Q9NPG8 344 aa18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 CHORDC1Q9UHD1 332 aaPredicted RBP18.14■□□□□ 0.49
RPUSD4-207ENST00000532800 BCLAF3A2AJT9 711 aaKnown RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 SLC9A3R1O14745 358 aaPredicted RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 TNFRSF10BO14763 440 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 ACTN4O43707 911 aaKnown RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 KRT37O76014 449 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 RTN3O95197 1032 aaPredicted RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 C4BPAP04003 597 aaKnown RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 ADH5P11766 374 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 CLDN10P78369 228 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 DNM1Q05193 864 aaKnown RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 KDSRQ06136 332 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 ORC1Q13415 861 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 CRY1Q16526 586 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 N4BP2L1Q5TBK1 243 aaPredicted RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 PMS2CLQ68D20 193 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 TTC30AQ86WT1 665 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 CEP57L1Q8IYX8 460 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 ALLCQ8N6M5 410 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 PDZD8Q8NEN9 1154 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 CCDC26Q8TAB7 109 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 CNOT6LQ96LI5 555 aaKnown RBP18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 EDEM2Q9BV94 578 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 CCSER2Q9H7U1 834 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 KRT82Q9NSB4 513 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 DMAC2Q9NW81 257 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 GMIPQ9P107 970 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 HMGXB4Q9UGU5 601 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 ATP8B3O60423 1300 aa18.13■□□□□ 0.49
RPUSD4-207ENST00000532800 KAT7O95251 611 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 KLF8O95600 359 aaPredicted RBP18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 CAVIN2O95810 425 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 ADH1CP00326 375 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 CCDC130P13994 396 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 TIE1P35590 1138 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 EIF2DP41214 584 aaKnown RBP18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 MRPS21P82921 87 aaKnown RBP18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 KMT5BQ4FZB7 885 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 USP39Q53GS9 565 aaKnown RBP18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 LY6G5CQ5SRR4 150 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 EMC10Q5UCC4 262 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 RNF43Q68DV7 783 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 ACOT1Q86TX2 421 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 DDX42Q86XP3 938 aaKnown RBP eCLIP18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 IL17RCQ8NAC3 791 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 TXNDC5Q8NBS9 432 aaKnown RBP18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 ZMIZ2Q8NF64 920 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 GOLGA5Q8TBA6 731 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 OVCA2Q8WZ82 227 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 WBP2Q969T9 261 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 SMARCD1Q96GM5 515 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 PAGE5Q96GU1 130 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 PNKPQ96T60 521 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 KCTD10Q9H3F6 313 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 DMAP1Q9NPF5 467 aaPredicted RBP18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 EXOC1Q9NV70 894 aa18.12■□□□□ 0.49
RPUSD4-207ENST00000532800 MYO18AQ92614 2054 aaKnown RBP18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 E2F8A0AVK6 867 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 SGK1O00141 431 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 AP1G2O75843 785 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 BEST1O76090 585 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 APODP05090 189 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 HSP90AA1P07900 732 aaKnown RBP18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 SLFN14P0C7P3 912 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 PGFP49763 221 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 AP3M2P53677 418 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 HECTD3Q5T447 861 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 PHTF2Q8N3S3 785 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 SPRYD3Q8NCJ5 442 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 TNIP3Q96KP6 325 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 SMOQ99835 787 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 ARHGEF4Q9NR80 690 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 IL37Q9NZH6 218 aa18.11■□□□□ 0.49
RPUSD4-207ENST00000532800 TNRC6BQ9UPQ9 1833 aaKnown RBP18.1■□□□□ 0.49
RPUSD4-207ENST00000532800 LNP1A1A4G5 178 aa18.1■□□□□ 0.49
RPUSD4-207ENST00000532800 NR3C1P04150 777 aa18.1■□□□□ 0.49
RPUSD4-207ENST00000532800 ZDHHC11BP0C7U3 371 aa18.1■□□□□ 0.49
RPUSD4-207ENST00000532800 IRF1P10914 325 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms