RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 USP3Q9Y6I4 520 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 NUMBLQ9Y6R0 609 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 TECTAO75443 2155 aa26.16■■□□□ 1.78
USP48-214ENST00000532737 C2orf78A6NCI8 922 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 CYP11B1P15538 503 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 FCARP24071 287 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 GPD2P43304 727 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 PPP3CCP48454 512 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 RGS7P49802 495 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 MEA1Q16626 185 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 TANGO2Q6ICL3 276 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 CACNA2D4Q7Z3S7 1137 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 PDZD8Q8NEN9 1154 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 KCTD13Q8WZ19 329 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 OVCA2Q8WZ82 227 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 TRPC7Q9HCX4 862 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 IGSF9Q9P2J2 1179 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 MYH10P35580 1976 aa26.15■■□□□ 1.78
USP48-214ENST00000532737 NCANO14594 1321 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 SOBPA7XYQ1 873 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 ABL1P00519 1130 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 ZDHHC11BP0C7U3 371 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 DDX6P26196 483 aaKnown RBP eCLIP26.14■■□□□ 1.78
USP48-214ENST00000532737 VIPR2P41587 438 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 TKTL1P51854 596 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 MTSS1LQ765P7 747 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 ARID3BQ8IVW6 561 aaPredicted RBP26.14■■□□□ 1.78
USP48-214ENST00000532737 CMTM8Q8IZV2 173 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 BAP1Q92560 729 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 SLC22A12Q96S37 553 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 CYP2S1Q96SQ9 504 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 KXD1Q9BQD3 176 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 SMG9Q9H0W8 520 aaKnown RBP26.14■■□□□ 1.78
USP48-214ENST00000532737 TRPV4Q9HBA0 871 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 LRRC4Q9HBW1 653 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 MUTYHQ9UIF7 546 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 PCDHGC3Q9UN70 934 aa26.14■■□□□ 1.78
USP48-214ENST00000532737 USP17L7P0C7H9 530 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 CCDC186Q7Z3E2 898 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 NOP9Q86U38 636 aaKnown RBP26.13■■□□□ 1.77
USP48-214ENST00000532737 SLC44A3Q8N4M1 653 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 WDTC1Q8N5D0 677 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 DDX1Q92499 740 aaKnown RBP26.13■■□□□ 1.77
USP48-214ENST00000532737 NXPE3Q969Y0 559 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 RSPRY1Q96DX4 576 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 PLA2G2FQ9BZM2 168 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 ULBP1Q9BZM6 244 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 TTYH3Q9C0H2 523 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 NMUR1Q9HB89 426 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 CYTH4Q9UIA0 394 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 ZMYM5Q9UJ78 669 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 PATJQ8NI35 1801 aa26.13■■□□□ 1.77
USP48-214ENST00000532737 PRAMEF12O95522 483 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 WEE1P30291 646 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 KRT9P35527 623 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 ADIGQ0VDE8 80 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 SNX30Q5VWJ9 437 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 SCD5Q86SK9 330 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 PASD1Q8IV76 773 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 ARL14EPQ8N8R7 260 aaPredicted RBP26.12■■□□□ 1.77
USP48-214ENST00000532737 EPS8L1Q8TE68 723 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 NDRG1Q92597 394 aaKnown RBP26.12■■□□□ 1.77
USP48-214ENST00000532737 HSFY1Q96LI6 401 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 ZFP14Q9HCL3 533 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 NOCTQ9UK39 431 aaKnown RBP26.12■■□□□ 1.77
USP48-214ENST00000532737 WDFY4Q6ZS81 3184 aa26.12■■□□□ 1.77
USP48-214ENST00000532737 A0A1W2PQH9 124 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 PIK3R2O00459 728 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 ECI2O75521 394 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 LCP1P13796 627 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 HDCP19113 662 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 RPL34P49207 117 aaKnown RBP26.11■■□□□ 1.77
USP48-214ENST00000532737 PDE6CP51160 858 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 TAF3Q5VWG9 929 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 PM20D1Q6GTS8 502 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 ELSPBP1Q96BH3 223 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 RNF38Q9H0F5 515 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 LHX5Q9H2C1 402 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 SMOC2Q9H3U7 446 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 TLR8Q9NR97 1041 aaKnown RBP26.11■■□□□ 1.77
USP48-214ENST00000532737 OSER1Q9NX31 292 aa26.11■■□□□ 1.77
USP48-214ENST00000532737 ZNF638Q14966 1978 aaKnown RBP26.11■■□□□ 1.77
USP48-214ENST00000532737 MYO10Q9HD67 2058 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 TRAV19A0A0A6YYK7 116 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 AP5Z1O43299 807 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 CBFA2T2O43439 604 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 ZBED1O96006 694 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 OAS1P00973 400 aaKnown RBP26.1■■□□□ 1.77
USP48-214ENST00000532737 AVPR1AP37288 418 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 ARID5AQ03989 594 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 TDGQ13569 410 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 FIGNQ5HY92 759 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 BHLHA9Q7RTU4 235 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 SIX6OS1Q8N1H7 587 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 STK32AQ8WU08 396 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 SLC20A1Q8WUM9 679 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 USP13Q92995 863 aaPredicted RBP26.1■■□□□ 1.77
USP48-214ENST00000532737 LRRC3BQ96PB8 259 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 SLC4A5Q9BY07 1137 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 EDEM3Q9BZQ6 932 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms