RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 OSER1Q9NX31 292 aa18.88■□□□□ 0.61
SMG1-203ENST00000532700 EP300Q09472 2414 aaPredicted RBP18.88■□□□□ 0.61
SMG1-203ENST00000532700 FAM92AA1XBS5 289 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 HRO43593 1189 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 RNF40O75150 1001 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 CILPO75339 1184 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 CYP17A1P05093 508 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 ZDHHC11BP0C7U3 371 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 KRT13P13646 458 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 IFNAR2P48551 515 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 C12orf40Q86WS4 652 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 IPO9Q96P70 1041 aaKnown RBP18.87■□□□□ 0.61
SMG1-203ENST00000532700 IER2Q9BTL4 223 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 CFAP97Q9P2B7 532 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 MAN1B1Q9UKM7 699 aa18.87■□□□□ 0.61
SMG1-203ENST00000532700 PAPSS2O95340 614 aaPredicted RBP18.86■□□□□ 0.61
SMG1-203ENST00000532700 CHRM1P11229 460 aaPredicted RBP18.86■□□□□ 0.61
SMG1-203ENST00000532700 RPL13P26373 211 aaKnown RBP18.86■□□□□ 0.61
SMG1-203ENST00000532700 ZNF394Q53GI3 561 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 COBLL1Q53SF7 1204 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 C1orf228Q6PIY5 440 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 UNC93AQ86WB7 457 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 CPA6Q8N4T0 437 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 SLITRK1Q96PX8 696 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 GSDMAQ96QA5 445 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 P2RY13Q9BPV8 354 aa18.86■□□□□ 0.61
SMG1-203ENST00000532700 PTPRZ1P23471 2315 aaPredicted RBP18.86■□□□□ 0.61
SMG1-203ENST00000532700 ATP8B3O60423 1300 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 SPTBN4Q9H254 2564 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 CYP26A1O43174 497 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 RTN3O95197 1032 aaPredicted RBP18.85■□□□□ 0.61
SMG1-203ENST00000532700 TBX18O95935 607 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 MBL2P11226 248 aaPredicted RBP18.85■□□□□ 0.61
SMG1-203ENST00000532700 P4HA1P13674 534 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 TGM1P22735 817 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 MXI1P50539 228 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 ENPEPQ07075 957 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 KRT39Q6A163 491 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 RUBCNQ92622 972 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 ATP2A3Q93084 1043 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 CCDC34Q96HJ3 373 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 TIGD1Q96MW7 591 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 HNRNPABQ99729 332 aaKnown RBP18.85■□□□□ 0.61
SMG1-203ENST00000532700 DUSP9Q99956 384 aaKnown RBP18.85■□□□□ 0.61
SMG1-203ENST00000532700 NMUR1Q9HB89 426 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 PARD6AQ9NPB6 346 aa18.85■□□□□ 0.61
SMG1-203ENST00000532700 SLC6A11P48066 632 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 GRSF1Q12849 480 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMG1-203ENST00000532700 DCAF17Q5H9S7 520 aaPredicted RBP18.84■□□□□ 0.61
SMG1-203ENST00000532700 PPP1R26Q5T8A7 1209 aaPredicted RBP18.84■□□□□ 0.61
SMG1-203ENST00000532700 SNX30Q5VWJ9 437 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 CD101Q93033 1021 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 SLC35C1Q96A29 364 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 CYFIP2Q96F07 1278 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 HINFPQ9BQA5 517 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 NT5C1AQ9BXI3 368 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 CYP3A43Q9HB55 503 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 RMND1Q9NWS8 449 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 NUDT5Q9UKK9 219 aa18.84■□□□□ 0.61
SMG1-203ENST00000532700 DNAH14Q0VDD8 3507 aa18.83■□□□□ 0.61
SMG1-203ENST00000532700 MDM4O15151 490 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 CETN3O15182 167 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 GREM1O60565 184 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 FAM200BP0CF97 657 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 EPB41P11171 864 aaKnown RBP18.83■□□□□ 0.6
SMG1-203ENST00000532700 PFKLP17858 780 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 PPP3CCP48454 512 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 RAD23BP54727 409 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 RHBDF2Q6PJF5 856 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 ADGRG2Q8IZP9 1017 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 SYNPOQ8N3V7 929 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 SLC4A11Q8NBS3 891 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 FBXL13Q8NEE6 735 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 RPLP0P6Q8NHW5 317 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 RMDN1Q96DB5 314 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 P2RY11Q96G91 374 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 HHIPQ96QV1 700 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 FAM126AQ9BYI3 521 aaPredicted RBP18.83■□□□□ 0.6
SMG1-203ENST00000532700 IMPG2Q9BZV3 1241 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 RAB20Q9NX57 234 aa18.83■□□□□ 0.6
SMG1-203ENST00000532700 PPP1R3GB7ZBB8 358 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 K7EQS6 105 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 BIN1O00499 593 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 IRF1P10914 325 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 GTF2H1P32780 548 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 DHCR24Q15392 516 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 HECTD3Q5T447 861 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 TCERG1LQ5VWI1 586 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 SCD5Q86SK9 330 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 BBS7Q8IWZ6 715 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 PDZD8Q8NEN9 1154 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 OVCA2Q8WZ82 227 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 ZDHHC4Q9NPG8 344 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 CISHQ9NSE2 258 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 EHD2Q9NZN4 543 aa18.82■□□□□ 0.6
SMG1-203ENST00000532700 A0A1W2PQH9 124 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 TULP2O00295 520 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 SLC16A3O15427 465 aaKnown RBP18.81■□□□□ 0.6
SMG1-203ENST00000532700 SMC2O95347 1197 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms