RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PLD1Q13393 1074 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 MYBPC2Q14324 1141 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 BLOC1S5Q8TDH9 187 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 SYNCRIPO60506 623 aaKnown RBP15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 TM4SF1P30408 202 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 ANXA11P50995 505 aaKnown RBP15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 NCKAP1LP55160 1127 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 CATSPERGQ6ZRH7 1159 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 SH2D3CQ8N5H7 860 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 ZNF513Q8N8E2 541 aaPredicted RBP15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 DDI1Q8WTU0 396 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 TMEM176AQ96HP8 235 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 HMX1Q9NP08 348 aaPredicted RBP15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 SPATS2LQ9NUQ6 558 aaKnown RBP15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 GID8Q9NWU2 228 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 WWOXQ9NZC7 414 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 CDYLQ9Y232 598 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 SLC12A8A0AV02 714 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 CAPN15O75808 1086 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 KLHL2O95198 593 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 POLE2P56282 527 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 NAT9Q9BTE0 207 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 A0A087X0T9 212 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 PGK1P00558 417 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 FAM228BP0C875 321 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 MZF1P28698 734 aaPredicted RBP15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 RAP1GDS1P52306 607 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 SKOR1P84550 965 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 FAM136AQ96C01 138 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 RBBP8Q99708 897 aa15.3■□□□□ 0.04
PCDHA9-202ENST00000532602 TISP43B9A030 160 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 ALOX15P16050 662 aaPredicted RBP15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 ITGALP20701 1170 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 PGM1P36871 562 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 CAPZA2P47755 286 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 FNTAP49354 379 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 AASDHQ4L235 1098 aaPredicted RBP15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 SGO1Q5FBB7 561 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 KAT2BQ92831 832 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 PHF21AQ96BD5 680 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 LACTBL1A8MY62 500 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 TSPAN3O60637 253 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 VPS26AO75436 327 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 SRP72O76094 671 aaKnown RBP15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 LRRC8BQ6P9F7 803 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 C11orf96Q7Z7L8 435 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 HES6Q96HZ4 224 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 PLA2G4CQ9UP65 541 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 RIC1Q4ADV7 1423 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 SPTLC1O15269 473 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 PBLDP30039 288 aaPredicted RBP15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 HOXA10P31260 410 aaPredicted RBP15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 RHBDL3P58872 404 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 FKBP1AP62942 108 aaKnown RBP15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 PPIL2Q13356 520 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 SLFN11Q7Z7L1 901 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 SLC5A5Q92911 643 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 CMTM5Q96DZ9 223 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 VPS28Q9UK41 221 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 TCP11X1B4DZS4 312 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 FKBP9O95302 570 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 RARRES1P49788 294 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 STARD3Q14849 445 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 FBXO47Q5MNV8 452 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 TREML2Q5T2D2 321 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 FAM171A1Q5VUB5 890 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 FKBP9P1Q75LS8 142 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 FAM131BQ86XD5 332 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 ARHGEF19Q8IW93 802 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 SLC39A10Q9ULF5 831 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 LSM8O95777 96 aaKnown RBP15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 RHOCP08134 193 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 KCNK10P57789 538 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 NCALDP61601 193 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 C16orf89Q6UX73 402 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 TNIP2Q8NFZ5 429 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 PNMA5Q96PV4 448 aa15.29■□□□□ 0.04
PCDHA9-202ENST00000532602 CARSP49589 748 aaKnown RBP15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 CDH8P55286 799 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 AGAP9Q5VTM2 703 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 UNC45BQ8IWX7 931 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 TADA1Q96BN2 335 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 ERP44Q9BS26 406 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 VIPAS39Q9H9C1 493 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 SPASTQ9UBP0 616 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 ITGA11Q9UKX5 1188 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 A0A087X0B3 334 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 EPB42P16452 691 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 TKTL1P51854 596 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 DMC1Q14565 340 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 BBS7Q8IWZ6 715 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 ZNF555Q8NEP9 628 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 THG1LQ9NWX6 298 aaKnown RBP15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 DYRK3O43781 588 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 KLRC2P26717 231 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms