RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 TKTL1P51854 596 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 GPM6BQ13491 265 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 SH3PXD2AQ5TCZ1 1133 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 RNF19BQ6ZMZ0 732 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 SPRED2Q7Z698 418 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 RXFP2Q8WXD0 754 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 CRISPLD1Q9H336 500 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 PCDHA3Q9Y5H8 950 aa23.05■■□□□ 1.28
PACSIN3-209ENST00000532457 H7C4K7 107 aa23.04■■□□□ 1.28
PACSIN3-209ENST00000532457 C2CD2LO14523 706 aa23.04■■□□□ 1.28
PACSIN3-209ENST00000532457 SOD2P04179 222 aa23.04■■□□□ 1.28
PACSIN3-209ENST00000532457 SLC1A1P43005 524 aa23.04■■□□□ 1.28
PACSIN3-209ENST00000532457 AADACL2Q6P093 401 aa23.04■■□□□ 1.28
PACSIN3-209ENST00000532457 C4orf50Q6ZRC1 276 aa23.04■■□□□ 1.28
PACSIN3-209ENST00000532457 SZT2Q5T011 3432 aa23.04■■□□□ 1.28
PACSIN3-209ENST00000532457 CTNNA2P26232 953 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 CTNNA1P35221 906 aaKnown RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 GPR15P49685 360 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 SNX16P57768 344 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 MRPS5P82675 430 aaKnown RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 CFAP221Q4G0U5 840 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 CC2D1AQ6P1N0 951 aaPredicted RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 ZDHHC17Q8IUH5 632 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 NIPA2Q8N8Q9 360 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 FNIP1Q8TF40 1166 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 PIK3R5Q8WYR1 880 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 LRCH3Q96II8 777 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 CLSTN3Q9BQT9 956 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 ADAM33Q9BZ11 813 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 ULBP1Q9BZM6 244 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 LRRC4Q9HBW1 653 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 ALG13Q9NP73 1137 aaKnown RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 DMAP1Q9NPF5 467 aaPredicted RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 MTRRQ9UBK8 725 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 SLC27A5Q9Y2P5 690 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 CDY1Q9Y6F8 540 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 PDGFRAP16234 1089 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 TFE3P19532 575 aaPredicted RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 PSMA2P25787 234 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 MAN1A1P33908 653 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 GRIK1P39086 918 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 GPR17Q13304 367 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 ZNF211Q13398 564 aaPredicted RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 PIGHQ14442 188 aaPredicted RBP23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 WHAMMP3Q1A5X7 153 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 CCDC14Q49A88 953 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 ATP13A4Q4VNC1 1196 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 SDHAF4Q5VUM1 108 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 TXNRD3NBQ6F5E7 133 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 HFE2Q6ZVN8 426 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 SLC26A9Q7LBE3 791 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 BHLHA9Q7RTU4 235 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 STKLD1Q8NE28 680 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 SCAMP5Q8TAC9 235 aa23.03■■□□□ 1.28
PACSIN3-209ENST00000532457 TNFRSF10BO14763 440 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 SOAT2O75908 522 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 USP17L7P0C7H9 530 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 ZNF143P52747 638 aaPredicted RBP23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 DSG1Q02413 1049 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 PSMD5Q16401 504 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 NFE2Q16621 373 aaPredicted RBP23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 DDR2Q16832 855 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 C15orf59Q2T9L4 293 aaPredicted RBP23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 SPPL3Q8TCT6 385 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 AUTS2Q8WXX7 1259 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 CFAP57Q96MR6 1250 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 PCDHB5Q9Y5E4 795 aa23.02■■□□□ 1.28
PACSIN3-209ENST00000532457 MTMR11A4FU01 709 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 MIF4GDA9UHW6 222 aaKnown RBP23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 SLU7O95391 586 aaKnown RBP23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 OR1D2P34982 312 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 SLC8B1Q6J4K2 584 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 SCN4BQ8IWT1 228 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 VPS52Q8N1B4 723 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 POF1BQ8WVV4 589 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 FUBP3Q96I24 572 aaKnown RBP eCLIP23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 PBKQ96KB5 322 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 HERC2P3Q9BVR0 1158 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 LMAN2LQ9H0V9 348 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 BACE2Q9Y5Z0 518 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 WDR27A2RRH5 827 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 YJEFN3A6XGL0 299 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 E7ENQ6 273 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 FYNP06241 537 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 PYGMP11217 842 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 CPB1P15086 417 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 GPD1P21695 349 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 SCNN1AP37088 669 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 KIAA1841Q6NSI8 718 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 SIX6OS1Q8N1H7 587 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 MYRIPQ8NFW9 859 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 SSX2IPQ9Y2D8 614 aa23.01■■□□□ 1.27
PACSIN3-209ENST00000532457 CEP104O60308 925 aa23■■□□□ 1.27
PACSIN3-209ENST00000532457 LRCH4O75427 683 aa23■■□□□ 1.27
PACSIN3-209ENST00000532457 DAOAP59103 153 aa23■■□□□ 1.27
PACSIN3-209ENST00000532457 ROR1Q01973 937 aa23■■□□□ 1.27
PACSIN3-209ENST00000532457 NAA30Q147X3 362 aaPredicted RBP23■■□□□ 1.27
PACSIN3-209ENST00000532457 PM20D1Q6GTS8 502 aa23■■□□□ 1.27
PACSIN3-209ENST00000532457 CNPY3Q9BT09 278 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms