RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 RAD54LQ92698 747 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 EXOC4Q96A65 974 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 P2RY11Q96G91 374 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 ZFRQ96KR1 1074 aaKnown RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 ZNF560Q96MR9 790 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 TSPAN18Q96SJ8 248 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 MRPL45Q9BRJ2 306 aaKnown RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 DPEP3Q9H4B8 488 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 CCDC86Q9H6F5 360 aaKnown RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 ABCB6Q9NP58 842 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 MAGEC2Q9UBF1 373 aaPredicted RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 STYXL1Q9Y6J8 313 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 NAV2Q8IVL1 2488 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 ZNF462Q96JM2 2506 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 MGAQ8IWI9 3026 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 TBC1D3BA6NDS4 549 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 UPK3BL1B0FP48 263 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 UPK3BL2E5RIL1 263 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 H0YCG3 227 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 LAD1O00515 517 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 GABRDO14764 452 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 AP5Z1O43299 807 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 TBCAO75347 108 aaKnown RBP9.57□□□□□ -0.88
USF1-210ENST00000531842 TULP3O75386 442 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 OAS1P00973 400 aaKnown RBP9.57□□□□□ -0.88
USF1-210ENST00000531842 HOXB2P14652 356 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 GRIA2P42262 883 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 BNC1Q01954 994 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 TAF10Q12962 218 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 GRIK2Q13002 908 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 ZNF423Q2M1K9 1284 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 PLEKHG6Q3KR16 790 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 CFAP221Q4G0U5 840 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 CCDC157Q569K6 752 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 DENND5BQ6ZUT9 1274 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 TOGARAM2Q6ZUX3 1019 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 CACUL1Q86Y37 369 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 BBS7Q8IWZ6 715 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 RGL4Q8IZJ4 473 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 FSIP1Q8NA03 581 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 ADAMTS14Q8WXS8 1223 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 BHMTQ93088 406 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 PCED1BQ96HM7 432 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 CBWD1Q9BRT8 395 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 CD248Q9HCU0 757 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 DNAAF2Q9NVR5 837 aaKnown RBP9.57□□□□□ -0.88
USF1-210ENST00000531842 TRPM5Q9NZQ8 1165 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 KCND2Q9NZV8 630 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 CHORDC1Q9UHD1 332 aaPredicted RBP9.57□□□□□ -0.88
USF1-210ENST00000531842 KCNG1Q9UIX4 513 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 PTPRQQ9UMZ3 2332 aa9.57□□□□□ -0.88
USF1-210ENST00000531842 PRRT4C9JH25 899 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 H0Y626 953 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 COCHO43405 550 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 CBFA2T3O75081 653 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 PPP1R37O75864 691 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 IL18RAPO95256 599 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 TRIM16O95361 564 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 ATXN1LP0C7T5 689 aaKnown RBP9.56□□□□□ -0.88
USF1-210ENST00000531842 PAX3P23760 479 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 MAGEA11P43364 429 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 SLC7A9P82251 487 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 CYP4F3Q08477 520 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 ANO4Q32M45 955 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 HS2ST1Q7LGA3 356 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 ZNF720Q7Z2F6 126 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 BRSK2Q8IWQ3 736 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 ZCCHC9Q8N567 271 aaKnown RBP9.56□□□□□ -0.88
USF1-210ENST00000531842 GLIS3Q8NEA6 775 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 SCAMP5Q8TAC9 235 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 KCNN1Q92952 543 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 SPATA17Q96L03 361 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 TTLL2Q9BWV7 592 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 ZNF518BQ9C0D4 1074 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 PRDM16Q9HAZ2 1276 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 TOR4AQ9NXH8 423 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 CACNA2D2Q9NY47 1150 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 RBAKQ9NYW8 714 aaPredicted RBP9.56□□□□□ -0.88
USF1-210ENST00000531842 BTBD3Q9Y2F9 522 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 KIF3AQ9Y496 699 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 PCDHB9Q9Y5E1 797 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.56□□□□□ -0.88
USF1-210ENST00000531842 KNTC1P50748 2209 aa9.56□□□□□ -0.88
USF1-210ENST00000531842 PLXNA2O75051 1894 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 A0A0A0MRY4 1105 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 H3BQV1 296 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 KCNK3O14649 394 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 C1QL1O75973 258 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 OLFM2O95897 454 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 ADH1CP00326 375 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 PNPLA4P41247 253 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 TNFRSF4P43489 277 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 SLFN12LQ6IEE8 588 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 LAYNQ6UX15 382 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 KIAA1324Q6UXG2 1013 aaKnown RBP9.55□□□□□ -0.88
USF1-210ENST00000531842 TMEM86AQ8N2M4 240 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 TOP6BLQ8N6T0 577 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms