RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CYP8B1Q9UNU6 501 aa9.85□□□□□ -0.83
NEDD8-206ENST00000531430 MYO18AQ92614 2054 aaKnown RBP9.85□□□□□ -0.83
NEDD8-206ENST00000531430 SPEGQ15772 3267 aa9.85□□□□□ -0.83
NEDD8-206ENST00000531430 TSC2P49815 1807 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 DMXL2Q8TDJ6 3036 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 ARHGAP33O14559 1287 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 GABRDO14764 452 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 TRIM66O15016 1216 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 TRIM24O15164 1050 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 ZIC2O95409 532 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 HOXB2P14652 356 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 TCF3P15923 654 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 YWHAQP27348 245 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 KIR2DL1P43626 348 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 PPP3CCP48454 512 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 SLC7A9P82251 487 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 DUOXA2Q1HG44 320 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 ZNF423Q2M1K9 1284 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 COL28A1Q2UY09 1125 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 HSF5Q4G112 596 aaPredicted RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 L1TD1Q5T7N2 865 aaKnown RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 LARP1BQ659C4 914 aaKnown RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 DPH6Q7L8W6 267 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 TRMT11Q7Z4G4 463 aaKnown RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 CHPFQ8IZ52 775 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 OR5B17Q8NGF7 314 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 HVCN1Q96D96 273 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 PCED1BQ96HM7 432 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 MRPL45Q9BRJ2 306 aaKnown RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 MED10Q9BTT4 135 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 MIR1-1HGQ9H1L0 117 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 ST6GALNAC4Q9H4F1 302 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 CCDC86Q9H6F5 360 aaKnown RBP9.84□□□□□ -0.83
NEDD8-206ENST00000531430 INTS13Q9NVM9 706 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 CALCOCO1Q9P1Z2 691 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 TBC1D14Q9P2M4 693 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 SIX4Q9UIU6 781 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 OBSL1O75147 1896 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 MYO16Q9Y6X6 1858 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 NBEAQ8NFP9 2946 aa9.84□□□□□ -0.83
NEDD8-206ENST00000531430 ZNF233A6NK53 670 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 A8MXQ7 604 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 CLDN5O00501 218 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 TULP3O75386 442 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 CD59P13987 128 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 GNSP15586 552 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 GAP43P17677 238 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 PFKLP17858 780 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 PTPN1P18031 435 aaKnown RBP9.83□□□□□ -0.84
NEDD8-206ENST00000531430 GABRG2P18507 467 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 TNNI1P19237 187 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 GARTP22102 1010 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 NTSR1P30989 418 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 CEBPZQ03701 1054 aaKnown RBP9.83□□□□□ -0.84
NEDD8-206ENST00000531430 PREPLQ4J6C6 727 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-206ENST00000531430 CCDC157Q569K6 752 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 SPDYCQ5MJ68 293 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 HECTD3Q5T447 861 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 SYCP2LQ5T4T6 812 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 KIAA1324Q6UXG2 1013 aaKnown RBP9.83□□□□□ -0.84
NEDD8-206ENST00000531430 USP49Q70CQ1 688 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 PDZD3Q86UT5 571 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 PROSER1Q86XN7 944 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 DDX42Q86XP3 938 aaKnown RBP eCLIP9.83□□□□□ -0.84
NEDD8-206ENST00000531430 TMEM25Q86YD3 366 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 NUP93Q8N1F7 819 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 GPD1LQ8N335 351 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 MYCBPAPQ8TBZ2 947 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 SCFD1Q8WVM8 642 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 KBTBD7Q8WVZ9 684 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 FBXO32Q969P5 355 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 LRIG1Q96JA1 1093 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 HSPA12BQ96MM6 686 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 SLC6A17Q9H1V8 727 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 PANK4Q9NVE7 773 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 SMC3Q9UQE7 1217 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 RAD54BQ9Y620 910 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 ANAPC1Q9H1A4 1944 aa9.83□□□□□ -0.84
NEDD8-206ENST00000531430 A0A0A0MRY4 1105 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 IGHV1OR15-9A0A0B4J2B8 117 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 ZNF217O75362 1048 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 CST3P01034 146 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 FTH1P19P0C7X4 201 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 DLATP10515 647 aaKnown RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 WARSP23381 471 aaKnown RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 EIF2DP41214 584 aaKnown RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 CASP5P51878 434 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 CACNA2D1P54289 1103 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 TNNC1P63316 161 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 TRPC3Q13507 836 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 HNRNPDQ14103 355 aaKnown RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 SURF1Q15526 300 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 SOWAHCQ53LP3 525 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 GRAMD4Q6IC98 578 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 TPGS1Q6ZTW0 290 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 RABEPKQ7Z6M1 372 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 RAB44Q7Z6P3 723 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 SLC41A1Q8IVJ1 513 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms