RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CCDC34Q96HJ3 373 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 RTKNQ9BST9 563 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 KRT82Q9NSB4 513 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 TBC1D14Q9P2M4 693 aa23.62■■□□□ 1.37
TRAPPC4-210ENST00000531290 TNFRSF10BO14763 440 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 SCAMP3O14828 347 aaKnown RBP23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 COCHO43405 550 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 AKAP3O75969 853 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 APBB3O95704 486 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 HLA-DRAP01903 254 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 CCDC130P13994 396 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 ORC1Q13415 861 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 DHCR24Q15392 516 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 NFIL3Q16649 462 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 SPOPLQ6IQ16 392 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 SLC2A14Q8TDB8 520 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 LOXL4Q96JB6 756 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.61■■□□□ 1.371e-22■■■■■ 419.2
TRAPPC4-210ENST00000531290 IL37Q9NZH6 218 aa23.61■■□□□ 1.37
TRAPPC4-210ENST00000531290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 CYP17A1P05093 508 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 PSMC2P35998 433 aaKnown RBP23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 OPRD1P41143 372 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 C1orf220Q5T0J3 134 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 SNX30Q5VWJ9 437 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 PRR23CQ6ZRP0 262 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 KBTBD6Q86V97 674 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 FAM186BQ8IYM0 893 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 GUF1Q8N442 669 aaKnown RBP23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 NETO1Q8TDF5 533 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 NACA2Q9H009 215 aa23.6■■□□□ 1.37
TRAPPC4-210ENST00000531290 E2F8A0AVK6 867 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 ZNF202O95125 648 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 ADH1CP00326 375 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 ASPAP45381 313 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 GCLMP48507 274 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 SEC13P55735 322 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 MAP3K7CLP57077 242 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 ADAM9Q13443 819 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 C2orf27AQ580R0 203 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 RHBDF2Q6PJF5 856 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 C12orf29Q8N999 325 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 CCDC150Q8NCX0 1101 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 PNKPQ96T60 521 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 SMOQ99835 787 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 DNAI2Q9GZS0 605 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 ARRDC1-AS1Q9H2J1 176 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 FBXO44Q9H4M3 255 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 FAM49BQ9NUQ9 324 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 GMIPQ9P107 970 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 SH3BP1Q9Y3L3 701 aa23.59■■□□□ 1.37
TRAPPC4-210ENST00000531290 DNAH14Q0VDD8 3507 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 K7EQS6 105 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 FAM200BP0CF97 657 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 TRIM49P0CI25 452 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 TRIM49CP0CI26 452 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 TUBP50607 506 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 TSTD1Q8NFU3 115 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 USP33Q8TEY7 942 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 GOLPH3LQ9H4A5 285 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 CCSER2Q9H7U1 834 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 MMRN2Q9H8L6 949 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 CYP3A43Q9HB55 503 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 CSNK1G1Q9HCP0 422 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 HMGXB4Q9UGU5 601 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 EBF1Q9UH73 591 aa23.58■■□□□ 1.37
TRAPPC4-210ENST00000531290 CEP250Q9BV73 2442 aa23.58■■□□□ 1.36
TRAPPC4-210ENST00000531290 FAM92AA1XBS5 289 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 DCDC2BA2VCK2 349 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 BEST1O76090 585 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 ZDHHC11BP0C7U3 371 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 ADORA2BP29275 332 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 SLC6A11P48066 632 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 DGKEP52429 567 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 ENPEPQ07075 957 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 GAB4Q2WGN9 574 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 ZMIZ2Q8NF64 920 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 TAS1R2Q8TE23 839 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 OTUB2Q96DC9 234 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 ZC3H10Q96K80 434 aaKnown RBP23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 NT5C1AQ9BXI3 368 aa23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 TLR8Q9NR97 1041 aaKnown RBP23.57■■□□□ 1.36
TRAPPC4-210ENST00000531290 CACNA1AO00555 2505 aa23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 APODP05090 189 aa23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 ADH5P11766 374 aa23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 EIF2DP41214 584 aaKnown RBP23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 MRPS21P82921 87 aaKnown RBP23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 PPP3CAQ08209 521 aa23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 ELF2Q15723 593 aa23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 C12orf50Q8NA57 414 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 CYFIP2Q96F07 1278 aa23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 HNRNPABQ99729 332 aaKnown RBP23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 GDPD2Q9HCC8 539 aa23.56■■□□□ 1.36
TRAPPC4-210ENST00000531290 SLC30A4O14863 429 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 TLR5O60602 858 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 RHOBTB1O94844 696 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 EPN2O95208 641 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 KAT7O95251 611 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 GTF2H1P32780 548 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 319 ms