RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SCAMP3O14828 347 aaKnown RBP16.74■□□□□ 0.27
CPSF1-205ENST00000531042 SLC30A4O14863 429 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 FOXD2O60548 495 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-205ENST00000531042 AP1G2O75843 785 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 RHOBTB3O94955 611 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 EPN2O95208 641 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 KIF20AO95235 890 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 APBB3O95704 486 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 SLC5A3P53794 718 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 DHCR24Q15392 516 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 SNX30Q5VWJ9 437 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 CRYBG2Q8N1P7 616 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 USP33Q8TEY7 942 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 ZC3H10Q96K80 434 aaKnown RBP16.74■□□□□ 0.27
CPSF1-205ENST00000531042 ARRDC1-AS1Q9H2J1 176 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 COMMD8Q9NX08 183 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 EBF1Q9UH73 591 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 FRMD4BQ9Y2L6 1034 aa16.74■□□□□ 0.27
CPSF1-205ENST00000531042 NCOR2Q9Y618 2525 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 FAM92AA1XBS5 289 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 MAPK13O15264 365 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 COCHO43405 550 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 GDF9O60383 454 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 ASS1P00966 412 aaKnown RBP16.73■□□□□ 0.27
CPSF1-205ENST00000531042 CCDC130P13994 396 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 ASPAP45381 313 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 VAMP7P51809 220 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 NDST1P52848 882 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 DPYDQ12882 1025 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 ORC1Q13415 861 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 NFIL3Q16649 462 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 SPOPLQ6IQ16 392 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 RHBDF2Q6PJF5 856 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 UNC93AQ86WB7 457 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 ZMIZ2Q8NF64 920 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 CCDC47Q96A33 483 aaKnown RBP16.73■□□□□ 0.27
CPSF1-205ENST00000531042 ZFRQ96KR1 1074 aaKnown RBP16.73■□□□□ 0.27
CPSF1-205ENST00000531042 SMOQ99835 787 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 CSNK1G1Q9HCP0 422 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 KRT82Q9NSB4 513 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 TBC1D14Q9P2M4 693 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 HMGXB4Q9UGU5 601 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 MYH10P35580 1976 aa16.73■□□□□ 0.27
CPSF1-205ENST00000531042 E2F8A0AVK6 867 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 ANTXRLA6NF34 631 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 BEST1O76090 585 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 HLA-DRAP01903 254 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 ZDHHC11BP0C7U3 371 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 ZNF806P0C7X5 589 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 EIF2DP41214 584 aaKnown RBP16.72■□□□□ 0.27
CPSF1-205ENST00000531042 PIK3CAP42336 1068 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 SLC6A11P48066 632 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 TUBP50607 506 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 SEC13P55735 322 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 PLK5Q496M5 336 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 C2orf27AQ580R0 203 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 SLC2A14Q8TDB8 520 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 CCSER2Q9H7U1 834 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 GMIPQ9P107 970 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 MYOFQ9NZM1 2061 aa16.72■□□□□ 0.27
CPSF1-205ENST00000531042 LAMA1P25391 3075 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 A0A1W2PQ27 194 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 A0A1W2PQ64 194 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 A0A1W2PQD8 194 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 ADH1CP00326 375 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 NR2F2P24468 414 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 MAP3K7CLP57077 242 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 MESP2Q0VG99 397 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 SF3A2Q15428 464 aaKnown RBP16.71■□□□□ 0.27
CPSF1-205ENST00000531042 CCDC6Q16204 474 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 KRBA2Q6ZNG9 492 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 INTS8Q75QN2 995 aaKnown RBP16.71■□□□□ 0.27
CPSF1-205ENST00000531042 C12orf29Q8N999 325 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 TSTD1Q8NFU3 115 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 OTUB2Q96DC9 234 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 PNKPQ96T60 521 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 SCAND2PQ9GZW5 306 aaPredicted RBP16.71■□□□□ 0.27
CPSF1-205ENST00000531042 DUSP15Q9H1R2 295 aaPredicted RBP16.71■□□□□ 0.27
CPSF1-205ENST00000531042 FAM49BQ9NUQ9 324 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 MMP17Q9ULZ9 603 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 MAPK8IP1Q9UQF2 711 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 PCDHGA5Q9Y5G8 931 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 SDK1Q7Z5N4 2213 aa16.71■□□□□ 0.27
CPSF1-205ENST00000531042 A0A0A0MRY4 1105 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 DCLK1O15075 740 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 TRIM49P0CI25 452 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 TRIM49CP0CI26 452 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 ADH5P11766 374 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 GCLMP48507 274 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 PGFP49763 221 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 DGKEP52429 567 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 MRPS21P82921 87 aaKnown RBP16.7■□□□□ 0.26
CPSF1-205ENST00000531042 ENPEPQ07075 957 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 PPP3CAQ08209 521 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 INCA1Q0VD86 236 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 AASDHQ4L235 1098 aaPredicted RBP16.7■□□□□ 0.26
CPSF1-205ENST00000531042 PLA2G2CQ5R387 149 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 C12orf40Q86WS4 652 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms