RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 USP13Q92995 863 aaPredicted RBP12.53□□□□□ -0.4
LTBP3-219ENST00000530990 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
LTBP3-219ENST00000530990 LRRC3BQ96PB8 259 aa12.53□□□□□ -0.4
LTBP3-219ENST00000530990 CYP2S1Q96SQ9 504 aa12.53□□□□□ -0.4
LTBP3-219ENST00000530990 GANQ9H2C0 597 aa12.53□□□□□ -0.4
LTBP3-219ENST00000530990 TDP1Q9NUW8 608 aa12.53□□□□□ -0.4
LTBP3-219ENST00000530990 OBP2AQ9NY56 170 aa12.53□□□□□ -0.4
LTBP3-219ENST00000530990 SIK3Q9Y2K2 1263 aa12.53□□□□□ -0.4
LTBP3-219ENST00000530990 MIA3Q5JRA6 1907 aa12.52□□□□□ -0.4
LTBP3-219ENST00000530990 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 EPHB6O15197 1021 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 THAP12O43422 761 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 PDGFBP01127 241 aaPredicted RBP12.52□□□□□ -0.41
LTBP3-219ENST00000530990 USP17L7P0C7H9 530 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 ZDHHC11BP0C7U3 371 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 SETSIPP0DME0 302 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 RFX1P22670 979 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 SLC8A3P57103 927 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 FCHO2Q0JRZ9 810 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 USP4Q13107 963 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 SYCP1Q15431 976 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 STILQ15468 1287 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 CNGA2Q16280 664 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 RAB41Q5JT25 222 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 IER5LQ5T953 404 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 MFSD6LQ8IWD5 586 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.41
LTBP3-219ENST00000530990 BPIFB1Q8TDL5 484 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 E2F7Q96AV8 911 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 TRMT61BQ9BVS5 477 aaKnown RBP12.52□□□□□ -0.41
LTBP3-219ENST00000530990 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
LTBP3-219ENST00000530990 CCSER2Q9H7U1 834 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 FAM207AQ9NSI2 230 aaPredicted RBP12.52□□□□□ -0.41
LTBP3-219ENST00000530990 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
LTBP3-219ENST00000530990 FBXL21Q9UKT6 434 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 CA14Q9ULX7 337 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 SCML2Q9UQR0 700 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
LTBP3-219ENST00000530990 KRBA1A5PL33 1030 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 F8VZ95 297 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
LTBP3-219ENST00000530990 COCHO43405 550 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 PFKLP17858 780 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 HDCP19113 662 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 GDI1P31150 447 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 RGS7P49802 495 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 PDE6CP51160 858 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ZXDBP98169 803 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 UBXN1Q04323 297 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ADIGQ0VDE8 80 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ZNF268Q14587 947 aaPredicted RBP12.51□□□□□ -0.41
LTBP3-219ENST00000530990 DRAP1Q14919 205 aaPredicted RBP12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ZNF77Q15935 545 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 SNX30Q5VWJ9 437 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 HFE2Q6ZVN8 426 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 CCDC186Q7Z3E2 898 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 YAF2Q8IY57 180 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 SIX5Q8N196 739 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 TTC16Q8NEE8 873 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 SLC35F5Q8WV83 523 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 FAM122AQ96E09 287 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ZFYVE19Q96K21 471 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ERGIC2Q96RQ1 377 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 UBXN6Q9BZV1 441 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 RNF38Q9H0F5 515 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 BRD9Q9H8M2 597 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 TLR8Q9NR97 1041 aaKnown RBP12.51□□□□□ -0.41
LTBP3-219ENST00000530990 OSER1Q9NX31 292 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 WNT16Q9UBV4 365 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 ARHGAP26Q9UNA1 814 aa12.51□□□□□ -0.41
LTBP3-219ENST00000530990 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 PRR33A8MZF0 331 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 ARNTLO00327 626 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 ZNF263O14978 683 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 TEX33O43247 280 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 MED7O43513 233 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 TLR5O60602 858 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 MBL2P11226 248 aaPredicted RBP12.5□□□□□ -0.41
LTBP3-219ENST00000530990 CLCN1P35523 988 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 PLA2G5P39877 138 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 TUBP50607 506 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 TKTL1P51854 596 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 POLR2FP61218 127 aaKnown RBP12.5□□□□□ -0.41
LTBP3-219ENST00000530990 SLC7A9P82251 487 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 PMF1Q6P1K2 205 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 DENND1BQ6P3S1 775 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 BHLHA9Q7RTU4 235 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 SLC47A2Q86VL8 602 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 FAM71AQ8IYT1 594 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 KCTD13Q8WZ19 329 aa12.5□□□□□ -0.41
LTBP3-219ENST00000530990 DNASE1L2Q92874 299 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms