RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ANLNQ9NQW6 1124 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 SCN11AQ9UI33 1791 aa8.55□□□□□ -1.04
CSDE1-213ENST00000530784 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-213ENST00000530784 KCPQ6ZWJ8 1503 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 ADAMTS7Q9UKP4 1686 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 COL15A1P39059 1388 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 F5H697 171 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 RNMTO43148 476 aaKnown RBP8.54□□□□□ -1.04
CSDE1-213ENST00000530784 PROM1O43490 865 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 TOMM70O94826 608 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 PPP3CBP16298 524 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 IL12RB1P42701 662 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 PPP1R32Q7Z5V6 425 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 DENND1CQ8IV53 801 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 PCSK9Q8NBP7 692 aaKnown RBP8.54□□□□□ -1.04
CSDE1-213ENST00000530784 TOR1AIP2Q8NFQ8 470 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 PPP1R35Q8TAP8 253 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 MYCBPAPQ8TBZ2 947 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 FBXL20Q96IG2 436 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 PDLIM2Q96JY6 352 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 TAAR9Q96RI9 348 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 ACO2Q99798 780 aaKnown RBP8.54□□□□□ -1.04
CSDE1-213ENST00000530784 PRDM13Q9H4Q3 707 aa8.54□□□□□ -1.04
CSDE1-213ENST00000530784 POLR2AP24928 1970 aaKnown RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 BRCA1P38398 1863 aaKnown RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 MGST3O14880 152 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 S100BP04271 92 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 CYP19A1P11511 503 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 CHRNA5P30532 468 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 PTH2RP49190 550 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 RARRES1P49788 294 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 SOX8P57073 446 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 SLC39A6Q13433 755 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 LRRC41Q15345 812 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 MTHFSDQ2M296 383 aaKnown RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 KHDC1LQ5JSQ8 128 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 EMC10Q5UCC4 262 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 KIAA0895LQ68EN5 471 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 MTFMTQ96DP5 389 aaKnown RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 CRAMP1Q96RY5 1269 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 LRFN3Q9BTN0 628 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 SARS2Q9NP81 518 aaKnown RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 GABBR1Q9UBS5 961 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 STAP2Q9UGK3 403 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 CPA4Q9UI42 421 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 NOB1Q9ULX3 412 aaKnown RBP8.53□□□□□ -1.04
CSDE1-213ENST00000530784 ZBTB1Q9Y2K1 713 aa8.53□□□□□ -1.04
CSDE1-213ENST00000530784 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 MYH14Q7Z406 1995 aaKnown RBP8.52□□□□□ -1.05
CSDE1-213ENST00000530784 A0A0B4J269 797 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 H3BML4 177 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 UBXN7O94888 489 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 MYBP10242 640 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 HTR1BP28222 390 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 TM4SF1P30408 202 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 NDUFV1P49821 464 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 TUBB3Q13509 450 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 BOP1Q14137 746 aaKnown RBP8.52□□□□□ -1.05
CSDE1-213ENST00000530784 CC2D1BQ5T0F9 858 aaKnown RBP8.52□□□□□ -1.05
CSDE1-213ENST00000530784 STRIP1Q5VSL9 837 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 C16orf71Q8IYS4 520 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-213ENST00000530784 TTC5Q8N0Z6 440 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 FAM46DQ8NEK8 389 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 CAGE1Q8TC20 777 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 TFAP2BQ92481 460 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 NARFQ9UHQ1 456 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 ARFGEF1Q9Y6D6 1849 aa8.52□□□□□ -1.05
CSDE1-213ENST00000530784 A0A088AWK7 358 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 MPPED1O15442 326 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 PRPF3O43395 683 aaKnown RBP8.51□□□□□ -1.05
CSDE1-213ENST00000530784 DNAJB5O75953 348 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 RAB1AP62820 205 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 NFE2Q16621 373 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-213ENST00000530784 FAM160B1Q5W0V3 765 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 ZBTB34Q8NCN2 500 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 B3GALNT2Q8NCR0 500 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 PGBD1Q96JS3 809 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 TLK1Q9UKI8 766 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 INSL6Q9Y581 213 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 RAD54BQ9Y620 910 aa8.51□□□□□ -1.05
CSDE1-213ENST00000530784 COL3A1P02461 1466 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-213ENST00000530784 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 STARD3NLO95772 234 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 SCGB1D2O95969 90 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 SERPINB2P05120 415 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 CHRM2P08172 466 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 PIM1P11309 404 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-213ENST00000530784 KCNJ5P48544 419 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 FGL2Q14314 439 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 ZNF362Q5T0B9 420 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-213ENST00000530784 KAZNQ674X7 775 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 CHPFQ8IZ52 775 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 AMBRA1Q9C0C7 1298 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
CSDE1-213ENST00000530784 NPC1L1Q9UHC9 1359 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 TRIAP1O43715 76 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 PPFIA2O75334 1257 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 SOAT2O75908 522 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 ITGALP20701 1170 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms