RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 CASTOR2A6NHX0 329 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ENTPD5O75356 428 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ZCCHC18P0CG32 403 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ETFBP38117 255 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ANKRD22Q5VYY1 191 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 SAMD3Q8N6K7 520 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 GPRC5AQ8NFJ5 357 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 AGAP11Q8TF27 550 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 GRAMD1AQ96CP6 724 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 MBOAT7Q96N66 472 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 ANLNQ9NQW6 1124 aa12.84□□□□□ -0.35
SCN3B-206ENST00000530277 C20orf96Q9NUD7 363 aaPredicted RBP12.84□□□□□ -0.35
SCN3B-206ENST00000530277 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 TGFB2P61812 414 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 BEX3Q00994 111 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 NSUN2Q08J23 767 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 PTK6Q13882 451 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 MORF4L2Q15014 288 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 TRIM67Q6ZTA4 783 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 CNPY3Q9BT09 278 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 LRRC19Q9H756 370 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 SLC17A7Q9P2U7 560 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 SCOCQ9UIL1 159 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 ZNF536O15090 1300 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 BTNL10A8MVZ5 291 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 KDELR1P24390 212 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 RPS12P25398 132 aaKnown RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 PMLP29590 882 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 ABHD15Q6UXT9 468 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 TMA16Q96EY4 203 aaKnown RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 TMEM120AQ9BXJ8 343 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 RNPEPQ9H4A4 650 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 TASP1Q9H6P5 420 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 CACNG4Q9UBN1 327 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 MYH11P35749 1972 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 ACKR2O00590 384 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 ASAP2O43150 1006 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 CYP2F1P24903 491 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 USP10Q14694 798 aaKnown RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 KCNT2Q6UVM3 1135 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 NIPA1Q7RTP0 329 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 SLFN11Q7Z7L1 901 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 SPATA24Q86W54 205 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 ZNF75CPQ92670 426 aaPredicted RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 MTBPQ96DY7 904 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 CYP4F12Q9HCS2 524 aa12.83□□□□□ -0.36
SCN3B-206ENST00000530277 ABT1Q9ULW3 272 aaKnown RBP12.83□□□□□ -0.36
SCN3B-206ENST00000530277 UBA6A0AVT1 1052 aaPredicted RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 E9PBE3 544 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 SCAMP3O14828 347 aaKnown RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 KLHL41O60662 606 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 KRT16P08779 473 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 IL1RL1Q01638 556 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 ADIGQ0VDE8 80 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 DBN1Q16643 649 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 TMEM259Q4ZIN3 620 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 CAPRIN2Q6IMN6 1127 aaKnown RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 SLC39A4Q6P5W5 647 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 LCA5Q86VQ0 697 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 IFNEQ86WN2 208 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 MFSD14AQ96MC6 490 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 PCDH9Q9HC56 1237 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 PTPRHQ9HD43 1115 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 IRAK4Q9NWZ3 460 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 A0A0B4J269 797 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 FAM237BA0A1B0GVD1 139 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 RPS6KA5O75582 802 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 ZMPSTE24O75844 475 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 JCHAINP01591 159 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 PTGIRP43119 386 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 ACCSLQ4AC99 568 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 BOLA3Q53S33 107 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 ATP6V1E2Q96A05 226 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 LENG1Q96BZ8 264 aaPredicted RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 TNIP3Q96KP6 325 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 IL1RL2Q9HB29 575 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 SPATS2LQ9NUQ6 558 aaKnown RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 PTPRJQ12913 1337 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 WDR27A2RRH5 827 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 EME2A4GXA9 379 aaPredicted RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 VDRP11473 427 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 PEX5P50542 639 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 ATXN1P54253 815 aaKnown RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 COG7P83436 770 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 ERO1BQ86YB8 467 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms