RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TPM2P07951 284 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 KRT5P13647 590 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF18P17022 549 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 BCAT1P54687 386 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 SLC7A9P82251 487 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 PDE4CQ08493 712 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 STILQ15468 1287 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 MLF2Q15773 248 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 ARHGAP44Q17R89 818 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 RAB41Q5JT25 222 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 HECTD3Q5T447 861 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 AOPEPQ8N6M6 819 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 UBA3Q8TBC4 463 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 MFSD1Q9H3U5 465 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 THG1LQ9NWX6 298 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 DNAJC12Q9UKB3 198 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 ARHGAP26Q9UNA1 814 aa13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCDC90B-216ENST00000529856 SYCE3A1L190 88 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 BECN2A8MW95 431 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 TULP2O00295 520 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 XPO1O14980 1071 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 TCF3P15923 654 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 PGFP49763 221 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 TUBP50607 506 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 CLCN5P51795 746 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 STARD6P59095 220 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 ZXDBP98169 803 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 PRKCQQ04759 706 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 BST2Q10589 180 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF77Q15935 545 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 KLHDC7AQ5VTJ3 777 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 SUGP1Q8IWZ8 645 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 RIN3Q8TB24 985 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 SHC3Q92529 594 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 SHDQ96IW2 340 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 FAM83CQ9BQN1 747 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 TLR8Q9NR97 1041 aaKnown RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 AJAP1Q9UKB5 411 aaPredicted RBP13.36□□□□□ -0.27
CCDC90B-216ENST00000529856 CYP26A1O43174 497 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 COCHO43405 550 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 SETSIPP0DME0 302 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 USP8P40818 1118 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF165P49910 485 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 USP4Q13107 963 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 CWF19L1Q69YN2 538 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 ASTLQ6HA08 431 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 FLCNQ8NFG4 579 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 CSGALNACT1Q8TDX6 532 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 SH3RF2Q8TEC5 729 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 SLC35F5Q8WV83 523 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF606Q8WXB4 792 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 CCSER2Q9H7U1 834 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 TBC1D17Q9HA65 648 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 OSER1Q9NX31 292 aa13.35□□□□□ -0.27
CCDC90B-216ENST00000529856 KIF26AQ9ULI4 1882 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 A0A1W2PQH9 124 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 M0QYV0 167 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 LEFTY2O00292 366 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 FOXN3O00409 490 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 STK25O00506 426 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 MED7O43513 233 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 TLR5O60602 858 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 MBL2P11226 248 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 GLULP15104 373 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 AOC1P19801 751 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 AVPR2P30518 371 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 PSEN1P49768 467 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 TKTL1P51854 596 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 MLLT6P55198 1093 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 MTF1Q14872 753 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 IQCB1Q15051 598 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 FKBP15Q5T1M5 1219 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 PM20D1Q6GTS8 502 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 CC2D1AQ6P1N0 951 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 TPRG1Q6ZUI0 275 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 SCD5Q86SK9 330 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 SECISBP2LQ93073 1101 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 LSM14BQ9BX40 385 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms