RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 KDRP35968 1356 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 COL4A3Q01955 1670 aa5.79□□□□□ -1.48
CSDE1-212ENST00000529046 TAF1LQ8IZX4 1826 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 TUBGCP6Q96RT7 1819 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 A0A087WWL8 130 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 CFAP69A5D8W1 941 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 CDKL5O76039 1030 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 SUN1O94901 812 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 SPDEFO95238 335 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 KRT18P05783 430 aaKnown RBP5.78□□□□□ -1.48
CSDE1-212ENST00000529046 TM4SF4P48230 202 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 PSMC1P62191 440 aaKnown RBP5.78□□□□□ -1.48
CSDE1-212ENST00000529046 SCAPQ12770 1279 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 ITPK1Q13572 414 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 CYP2A13Q16696 494 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 SPDYE7PQ495Y7 208 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 USP37Q86T82 979 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 SLC17A8Q8NDX2 589 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 NACC2Q96BF6 587 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 ZC3H10Q96K80 434 aaKnown RBP5.78□□□□□ -1.48
CSDE1-212ENST00000529046 CRAMP1Q96RY5 1269 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 P2RX7Q99572 595 aaKnown RBP5.78□□□□□ -1.48
CSDE1-212ENST00000529046 CNPPD1Q9BV87 410 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 SPATA5L1Q9BVQ7 753 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 LRRC27Q9C0I9 530 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 NUP62CLQ9H1M0 184 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 CNNM1Q9NRU3 951 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 MRPS18AQ9NVS2 196 aaKnown RBP5.78□□□□□ -1.48
CSDE1-212ENST00000529046 RNF181Q9P0P0 153 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 PAXBP1Q9Y5B6 917 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 ITGB4P16144 1822 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 ADCY9O60503 1353 aa5.78□□□□□ -1.48
CSDE1-212ENST00000529046 GOLGB1Q14789 3259 aaKnown RBP5.77□□□□□ -1.49
CSDE1-212ENST00000529046 TOGARAM1Q9Y4F4 1720 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 CCDC195A0A1B0GUA6 201 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 PIPSLA2A3N6 862 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 TRIM43BA6NCK2 446 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 APAF1O14727 1248 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 GPANK1O95872 356 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 FOSP01100 380 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-212ENST00000529046 GNAI2P04899 355 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 KITP10721 976 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 HSPA5P11021 654 aaKnown RBP5.77□□□□□ -1.49
CSDE1-212ENST00000529046 KCNA2P16389 499 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 PHKA1P46020 1223 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 CXADRP78310 365 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 BLOC1S1P78537 153 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 HSD11B2P80365 405 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 FMO1Q01740 532 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 PIGFQ07326 219 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 CNGA2Q16280 664 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 ABHD17BQ5VST6 288 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 FAM160B1Q5W0V3 765 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 MICU3Q86XE3 530 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 ASB10Q8WXI3 467 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 PHKBQ93100 1093 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 CAVIN3Q969G5 261 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 TRIM43Q96BQ3 446 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-212ENST00000529046 COQ10AQ96MF6 247 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 ZSWIM1Q9BR11 485 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 IMPG2Q9BZV3 1241 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 HESX1Q9UBX0 185 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 CPA4Q9UI42 421 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-212ENST00000529046 NOX1Q9Y5S8 564 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 UBR3Q6ZT12 1888 aa5.77□□□□□ -1.49
CSDE1-212ENST00000529046 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-212ENST00000529046 ERN1O75460 977 aaKnown RBP5.76□□□□□ -1.49
CSDE1-212ENST00000529046 HKR1P10072 659 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 ITGAMP11215 1152 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 TGM1P22735 817 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 ADRA1BP35368 520 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 VIPR2P41587 438 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 SLC11A2P49281 568 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 MTHFSP49914 203 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 ANXA11P50995 505 aaKnown RBP5.76□□□□□ -1.49
CSDE1-212ENST00000529046 WNT3P56703 355 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 ZNF844Q08AG5 666 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 COBLL1Q53SF7 1204 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 SP5Q6BEB4 398 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-212ENST00000529046 MORC1Q86VD1 984 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 SESTD1Q86VW0 696 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 NAA15Q9BXJ9 866 aaKnown RBP5.76□□□□□ -1.49
CSDE1-212ENST00000529046 ALOXE3Q9BYJ1 711 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 SLAMF7Q9NQ25 335 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 SYBUQ9NX95 663 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 COL20A1Q9P218 1284 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 ZNHIT2Q9UHR6 403 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 KNSTRNQ9Y448 316 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.76□□□□□ -1.49
CSDE1-212ENST00000529046 NPC1L1Q9UHC9 1359 aa5.76□□□□□ -1.49
CSDE1-212ENST00000529046 KDM6AO15550 1401 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-212ENST00000529046 CICQ96RK0 1608 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-212ENST00000529046 PRAMEF33A0A0G2JMD5 474 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 BTN3A1O00481 513 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 PMM2O15305 246 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 MGEA5O60502 916 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 PRAMEF10O60809 474 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 SOAT2O75908 522 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms