RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 STXBP4Q6ZWJ1 553 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 NT5DC4Q86YG4 428 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 BRSK2Q8IWQ3 736 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SYNPOQ8N3V7 929 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SVOPQ8N4V2 548 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 BEST2Q8NFU1 509 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SCFD1Q8WVM8 642 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 FAM213AQ9BRX8 229 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 TRMT61BQ9BVS5 477 aaKnown RBP9.11□□□□□ -0.95
SSBP3-212ENST00000528930 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 GOLPH3LQ9H4A5 285 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SLC39A2Q9NP94 309 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 USP25Q9UHP3 1055 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SCN1AP35498 2009 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 FBN3Q75N90 2809 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 H7C4K7 107 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 DCLK1O15075 740 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 OAZ2O95190 189 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 IL18RAPO95256 599 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 C8AP07357 584 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 C6P13671 934 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 ENGP17813 658 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 SYKP43405 635 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 MAPK8P45983 427 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 NUCB2P80303 420 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 STK4Q13043 487 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 QPCTQ16769 361 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 BMT2Q1RMZ1 405 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 ARMCX5Q6P1M9 558 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 PKN3Q6P5Z2 889 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 TMPRSS7Q7RTY8 843 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 CYP2U1Q7Z449 544 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 FMNL3Q8IVF7 1028 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 PARP9Q8IXQ6 854 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 CCDC116Q8IYX3 515 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 CEP57L1Q8IYX8 460 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 GPD1LQ8N335 351 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 CAMKK1Q8N5S9 505 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 PNPLA1Q8N8W4 532 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 APPL2Q8NEU8 664 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 ZNF461Q8TAF7 563 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 CXorf38Q8TB03 319 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 ING5Q8WYH8 240 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 DPP3Q9NY33 737 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 HSPBP1Q9NZL4 362 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 FBXL5Q9UKA1 691 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 TIMM13Q9Y5L4 95 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-212ENST00000528930 CACNA1DQ01668 2161 aa9.1□□□□□ -0.95
SSBP3-212ENST00000528930 UBE4BO95155 1302 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 TRABD2BA6NFA1 517 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 KIAA0391O15091 583 aaKnown RBP9.09□□□□□ -0.95
SSBP3-212ENST00000528930 SEC24AO95486 1093 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 VNN2O95498 520 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 MYL1P05976 194 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 CD59P13987 128 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 ATF2P15336 505 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 TYMPP19971 482 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 EIF2S3P41091 472 aaKnown RBP9.09□□□□□ -0.95
SSBP3-212ENST00000528930 YWHAHQ04917 246 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-212ENST00000528930 PSMD2Q13200 908 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 GLIPR1L2Q4G1C9 344 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 CTXN3Q4LDR2 81 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 TRIM61Q5EBN2 209 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 PPM1LQ5SGD2 360 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 ZNF280DQ6N043 979 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 VITQ6UXI7 678 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 DSTYKQ6XUX3 929 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 KRBA2Q6ZNG9 492 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 TOGARAM2Q6ZUX3 1019 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 RTL10Q7L3V2 364 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 CBWD2Q8IUF1 395 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 NELFCDQ8IXH7 590 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 TCEAL8Q8IYN2 117 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 VWA5B2Q8N398 1253 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 FSIP1Q8NA03 581 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
SSBP3-212ENST00000528930 KIAA0895Q8NCT3 520 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 SLC7A14Q8TBB6 771 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 FAM84AQ96KN4 292 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 SENP8Q96LD8 212 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 PDE11AQ9HCR9 933 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 POLMQ9NP87 494 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-212ENST00000528930 AGPAT3Q9NRZ7 376 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 HCFC1R1Q9NWW0 138 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 RBAKQ9NYW8 714 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-212ENST00000528930 KNTC1P50748 2209 aa9.09□□□□□ -0.95
SSBP3-212ENST00000528930 SPTBN1Q01082 2364 aaKnown RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 ARHGEF37A1IGU5 675 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 CLIC2O15247 247 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 CCL16O15467 120 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 ZNF202O95125 648 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 CYP11A1P05108 521 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 PSMC3P17980 439 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 POU3F2P20265 443 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 PAX3P23760 479 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 GDI1P31150 447 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 IL12RB1P42701 662 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 ARPP19P56211 112 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms