RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 UNGP13051 313 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 EPCAMP16422 314 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 MMP8P22894 467 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 IGFBP6P24592 240 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 EPHA5P54756 1037 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 NOMO3P69849 1222 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 GPC5P78333 572 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 MRPS5P82675 430 aaKnown RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 SLC6A3Q01959 620 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 ADIGQ0VDE8 80 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 ORC1Q13415 861 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 DDR2Q16832 855 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 HS1BP3Q53T59 392 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 CCDC122Q5T0U0 273 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 SNX30Q5VWJ9 437 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 NAA35Q5VZE5 725 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 BTBD8Q5XKL5 378 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 DCUN1D2Q6PH85 259 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 RSPO2Q6UXX9 243 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 RSRC2Q7L4I2 434 aaKnown RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 OTOP3Q7RTS5 596 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 ADGRD2Q7Z7M1 963 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 KIAA1328Q86T90 577 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 TTC30AQ86WT1 665 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 LRRC8AQ8IWT6 810 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 C3orf20Q8ND61 904 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 UBA3Q8TBC4 463 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 NXPE3Q969Y0 559 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 FAM161BQ96MY7 647 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 TMEM209Q96SK2 561 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 SMOQ99835 787 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 KIF9Q9HAQ2 790 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 POPDC2Q9HBU9 364 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 TMLHEQ9NVH6 421 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 IL37Q9NZH6 218 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 SLC12A6Q9UHW9 1150 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 NAGPAQ9UK23 515 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 MAGED2Q9UNF1 606 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 EPN1Q9Y6I3 576 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-211ENST00000528787 USP3Q9Y6I4 520 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 MYO7AQ13402 2215 aa8.33□□□□□ -1.08
SSBP3-211ENST00000528787 TNFRSF10BO14763 440 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 CCL16O15467 120 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 CSPG5O95196 566 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 NDUFA10O95299 355 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 LCA5LO95447 670 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 SEC24AO95486 1093 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 LTFP02788 710 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 FTLP02792 175 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 RHOP08100 348 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 TMEM253P0C7T8 217 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 SPATA31D3P0C874 917 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 KRT3P12035 628 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 LCP1P13796 627 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 ATF6P18850 670 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 WEE1P30291 646 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 AVPR1AP37288 418 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 MAGEA1P43355 309 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 AIF1P55008 147 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 YWHAGP61981 247 aaKnown RBP eCLIP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 YWHAZP63104 245 aaKnown RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 COG7P83436 770 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 KIF5AQ12840 1032 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 NNTQ13423 1086 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 SMAD4Q13485 552 aaKnown RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 HECTD3Q5T447 861 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 HGSNATQ68CP4 663 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 SCARA3Q6AZY7 606 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 OR6B2Q6IFH4 312 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 PMF1Q6P1K2 205 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 DENND1BQ6P3S1 775 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 DNAJC24Q6P3W2 148 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 SPATA31D4Q6ZUB0 917 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 PAQR9Q6ZVX9 377 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 MTSS1LQ765P7 747 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 SLC26A9Q7LBE3 791 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF571Q7Z3V5 609 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 PASD1Q8IV76 773 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 TMEM130Q8N3G9 435 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 SLC30A5Q8TAD4 765 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 MYLIPQ8WY64 445 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 EXOC4Q96A65 974 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 ELMO3Q96BJ8 720 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 FAM149B1Q96BN6 582 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 PPP1R9BQ96SB3 815 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 KCNK16Q96T55 309 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 DDX50Q9BQ39 737 aaKnown RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 CORO1BQ9BR76 489 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 UBE2ZQ9H832 354 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 WDR6Q9NNW5 1121 aaKnown RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 DONSONQ9NYP3 566 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 ARHGAP20Q9P2F6 1191 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 AJAP1Q9UKB5 411 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF510Q9Y2H8 683 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 MRPS23Q9Y3D9 190 aaKnown RBP8.32□□□□□ -1.08
SSBP3-211ENST00000528787 NME7Q9Y5B8 376 aa8.32□□□□□ -1.08
SSBP3-211ENST00000528787 LAMA2P24043 3122 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms