RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ECT2Q9H8V3 914 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 KIAA1468Q9P260 1216 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 RIF1Q5UIP0 2472 aaKnown RBP34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 LEFTY2O00292 366 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 TRDMT1O14717 391 aaKnown RBP34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 ABL1P00519 1130 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 CCR3P51677 355 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 CSTF1Q05048 431 aaKnown RBP34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 PAK1Q13153 545 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 HECTD3Q5T447 861 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 ASCL5Q7RTU5 278 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 SPEM1Q8N4L4 309 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 TATDN2Q93075 761 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 CHFRQ96EP1 664 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 CTNND2Q9UQB3 1225 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 CPQQ9Y646 472 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 WNT6Q9Y6F9 365 aa34.95■■■■□ 3.19
SSSCA1-205ENST00000527920 HHLA1C9JL84 531 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 FMO5P49326 533 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 PPP2R5DQ14738 602 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 CCDC40Q4G0X9 1142 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 TMEM196Q5HYL7 178 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 EXOC4Q96A65 974 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 ARID3AQ99856 593 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 GMIPQ9P107 970 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 PCDHGA2Q9Y5H1 932 aa34.94■■■■□ 3.18
SSSCA1-205ENST00000527920 HELZP42694 1942 aaKnown RBP34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 GNA14O95837 355 aa34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 RAD23BP54727 409 aa34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 CUL2Q13617 745 aa34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 SLC4A11Q8NBS3 891 aa34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 TMEM176AQ96HP8 235 aa34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 CHORDC1Q9UHD1 332 aaPredicted RBP34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 R4GN57 208 aa34.93■■■■□ 3.18
SSSCA1-205ENST00000527920 P4HA2O15460 535 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 PAPSS2O95340 614 aaPredicted RBP34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 MARSP56192 900 aaKnown RBP34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 YWHAEP62258 255 aaKnown RBP34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 GRSF1Q12849 480 aaKnown RBP eCLIP34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 NR1H3Q13133 447 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 GAS6Q14393 721 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 ZNF394Q53GI3 561 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 ZBTB44Q8NCP5 570 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 HEXIM2Q96MH2 286 aaKnown RBP34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 DUSP16Q9BY84 665 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 RBM12Q9NTZ6 932 aaKnown RBP34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 SCML2Q9UQR0 700 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 DMDP11532 3685 aa34.92■■■■□ 3.18
SSSCA1-205ENST00000527920 SLC9A3R1O14745 358 aaPredicted RBP34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 COCHO43405 550 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 NFATC1O95644 943 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 TDGF1P13385 188 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 TBXAS1P24557 533 aaPredicted RBP34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 GJA4P35212 333 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 PPP1R26Q5T8A7 1209 aaPredicted RBP34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 ARHGAP17Q68EM7 881 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 TTC16Q8NEE8 873 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 TLR8Q9NR97 1041 aaKnown RBP34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 ZSCAN32Q9NX65 697 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 FANCMQ8IYD8 2048 aa34.91■■■■□ 3.18
SSSCA1-205ENST00000527920 FAM186AA6NE01 2351 aa34.9■■■■□ 3.18
SSSCA1-205ENST00000527920 MBL2P11226 248 aaPredicted RBP34.9■■■■□ 3.18
SSSCA1-205ENST00000527920 GPRIN1Q7Z2K8 1008 aa34.9■■■■□ 3.18
SSSCA1-205ENST00000527920 TRIM59Q8IWR1 403 aa34.9■■■■□ 3.18
SSSCA1-205ENST00000527920 ZFRQ96KR1 1074 aaKnown RBP34.9■■■■□ 3.18
SSSCA1-205ENST00000527920 SMPD4Q9NXE4 827 aa34.9■■■■□ 3.18
SSSCA1-205ENST00000527920 CXCL12P48061 93 aa34.89■■■■□ 3.18
SSSCA1-205ENST00000527920 CETN1Q12798 172 aa34.89■■■■□ 3.18
SSSCA1-205ENST00000527920 CLEC17AQ6ZS10 378 aa34.89■■■■□ 3.18
SSSCA1-205ENST00000527920 LINC00597Q9H2U6 94 aa34.89■■■■□ 3.18
SSSCA1-205ENST00000527920 FGFR1OPO95684 399 aaKnown RBP34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 LMNAP02545 664 aaKnown RBP34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 DRD1P21728 446 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 KIF11P52732 1056 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 NRLP54845 237 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 CAMK4Q16566 473 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 FSTL4Q6MZW2 842 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 Q6ZS52 159 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 P2RY13Q9BPV8 354 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 UBXN6Q9BZV1 441 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 CCSER2Q9H7U1 834 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 CYLDQ9NQC7 956 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 CFAP97Q9P2B7 532 aa34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 PTPRZ1P23471 2315 aaPredicted RBP34.88■■■■□ 3.17
SSSCA1-205ENST00000527920 E2F8A0AVK6 867 aa34.87■■■■□ 3.17
SSSCA1-205ENST00000527920 ACO1P21399 889 aaKnown RBP34.87■■■■□ 3.17
SSSCA1-205ENST00000527920 STX17P56962 302 aa34.87■■■■□ 3.17
SSSCA1-205ENST00000527920 UBR7Q8N806 425 aa34.87■■■■□ 3.17
SSSCA1-205ENST00000527920 TBC1D14Q9P2M4 693 aa34.87■■■■□ 3.17
SSSCA1-205ENST00000527920 RWDD2AQ9UIY3 292 aa34.87■■■■□ 3.17
SSSCA1-205ENST00000527920 TLR5O60602 858 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 LILRB5O75023 590 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 FBXO43Q4G163 708 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 TSSK4Q6SA08 328 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 CCDC186Q7Z3E2 898 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 ATRIPQ8WXE1 791 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 OTUB2Q96DC9 234 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 NT5C1BQ96P26 610 aa34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 SRRTQ9BXP5 876 aaKnown RBP34.86■■■■□ 3.17
SSSCA1-205ENST00000527920 USP3Q9Y6I4 520 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms