RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 SIX4Q9UIU6 781 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 EXOC7Q9UPT5 735 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 STARD13Q9Y3M8 1113 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 PLXNB3Q9ULL4 1909 aa13.13□□□□□ -0.31
SRPRA-202ENST00000527817 IGHV1OR15-9A0A0B4J2B8 117 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 TRIM66O15016 1216 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 SEC24BO95487 1268 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 KRT19P08727 400 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 FTH1P19P0C7X4 201 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 GARTP22102 1010 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 ANXA13P27216 316 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 LONP1P36776 959 aaKnown RBP13.12□□□□□ -0.31
SRPRA-202ENST00000527817 KDSRQ06136 332 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 LY6G5CQ5SRR4 150 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 TDRD10Q5VZ19 366 aaKnown RBP13.12□□□□□ -0.31
SRPRA-202ENST00000527817 SLC41A1Q8IVJ1 513 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 ETFBKMTQ8IXQ9 262 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
SRPRA-202ENST00000527817 OR2I1PQ8NGU4 316 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 MYLPFQ96A32 169 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 ZNF419Q96HQ0 510 aaPredicted RBP13.12□□□□□ -0.31
SRPRA-202ENST00000527817 CAMK1GQ96NX5 476 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 ACCSQ96QU6 501 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
SRPRA-202ENST00000527817 FAM124BQ9H5Z6 455 aaPredicted RBP13.12□□□□□ -0.31
SRPRA-202ENST00000527817 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 KIAA1522Q9P206 1035 aaPredicted RBP13.12□□□□□ -0.31
SRPRA-202ENST00000527817 DEC1Q9P2X7 70 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 SEL1LQ9UBV2 794 aa13.12□□□□□ -0.31
SRPRA-202ENST00000527817 KNL1Q8NG31 2342 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 KNTC1P50748 2209 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 ABL1P00519 1130 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 PDGFRBP09619 1106 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 WARSP23381 471 aaKnown RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 NTSR1P30989 418 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 PSMC1P62191 440 aaKnown RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 KCNA1Q09470 495 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 TAF10Q12962 218 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 L1TD1Q5T7N2 865 aaKnown RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 GLRX5Q86SX6 157 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 TRIML1Q8N9V2 468 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 SLITRK1Q96PX8 696 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 CALCOCO1Q9P1Z2 691 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 SUSD2Q9UGT4 822 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
SRPRA-202ENST00000527817 APOBEC2Q9Y235 224 aaKnown RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 R3HCC1Q9Y3T6 440 aaKnown RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
SRPRA-202ENST00000527817 BPTFQ12830 3046 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 A0A1W2PQF6 199 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 F8VP50 259 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-202ENST00000527817 SCAMP3O14828 347 aaKnown RBP13.1□□□□□ -0.31
SRPRA-202ENST00000527817 HOXC11O43248 304 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-202ENST00000527817 TULP3O75386 442 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 TMEM191BP0C7N4 346 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 MBL2P11226 248 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-202ENST00000527817 HOXB2P14652 356 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 CYP27A1Q02318 531 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 SYCP2LQ5T4T6 812 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 SLCO6A1Q86UG4 719 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 NAT16Q8N8M0 369 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 PNPLA1Q8N8W4 532 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 TERB1Q8NA31 727 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 ANKRD36BP1Q96IX9 119 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 ZDHHC5Q9C0B5 715 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 MRPL44Q9H9J2 332 aaKnown RBP13.1□□□□□ -0.31
SRPRA-202ENST00000527817 CD248Q9HCU0 757 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 INTS13Q9NVM9 706 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
SRPRA-202ENST00000527817 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 CBFA2T3O75081 653 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 GNSP15586 552 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 GAP43P17677 238 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 GNL1P36915 607 aaPredicted RBP13.09□□□□□ -0.31
SRPRA-202ENST00000527817 PLEKHG6Q3KR16 790 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 WDR45BQ5MNZ6 344 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 SDE2Q6IQ49 451 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 TOGARAM2Q6ZUX3 1019 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 RGL4Q8IZJ4 473 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 RASSF8Q8NHQ8 419 aa13.09□□□□□ -0.31
SRPRA-202ENST00000527817 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms