RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 LEFTY2O00292 366 aa27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 AFPP02771 609 aaKnown RBP27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 TUBP50607 506 aa27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 ZXDBP98169 803 aa27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 LMO3Q8TAP4 145 aa27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 MED15Q96RN5 788 aa27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 GMIPQ9P107 970 aa27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 CPQQ9Y646 472 aa27.85■■■□□ 2.05
TSPAN4-217ENST00000527644 ARSAP15289 507 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 IFNAR2P48551 515 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 AMPD2Q01433 879 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 TXNDC11Q6PKC3 985 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 UBR7Q8N806 425 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 EHBP1Q8NDI1 1231 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 PHOX2BQ99453 314 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 TLR8Q9NR97 1041 aaKnown RBP27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 SCML2Q9UQR0 700 aa27.84■■■□□ 2.05
TSPAN4-217ENST00000527644 CACNA1IQ9P0X4 2223 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 HELZP42694 1942 aaKnown RBP27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 MBL2P11226 248 aaPredicted RBP27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 CHRNB1P11230 501 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 ACO1P21399 889 aaKnown RBP27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 HOXD11P31277 338 aaPredicted RBP27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 GPRIN1Q7Z2K8 1008 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 DDX42Q86XP3 938 aaKnown RBP eCLIP27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 CPA6Q8N4T0 437 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 ATP2A3Q93084 1043 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 JAKMIP2Q96AA8 810 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 IER2Q9BTL4 223 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 UBXN6Q9BZV1 441 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 CHRDQ9H2X0 955 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 KIAA1257Q9ULG3 409 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 WNT6Q9Y6F9 365 aa27.83■■■□□ 2.05
TSPAN4-217ENST00000527644 OTOL1A6NHN0 477 aaPredicted RBP27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 COCHO43405 550 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 LAMTOR5O43504 91 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 NBL1P41271 181 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 KIF11P52732 1056 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 LRRC32Q14392 662 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 EML3Q32P44 896 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 PPM1KQ8N3J5 372 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 ANKRD52Q8NB46 1076 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 CNOT6LQ96LI5 555 aaKnown RBP27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 ECT2Q9H8V3 914 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 SMPD4Q9NXE4 827 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 DACH1Q9UI36 760 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 PATJQ8NI35 1801 aa27.82■■■□□ 2.04
TSPAN4-217ENST00000527644 GOLGA6L22H0YM25 854 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 SLC8A3P57103 927 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 PON2Q15165 354 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 SGO2Q562F6 1265 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 DGKKQ5KSL6 1271 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 MAMSTRQ6ZN01 415 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 CREBRFQ8IUR6 639 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 MAML2Q8IZL2 1156 aaPredicted RBP27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 CCSER2Q9H7U1 834 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 FBXO4Q9UKT5 387 aa27.81■■■□□ 2.04
TSPAN4-217ENST00000527644 PROB1E7EW31 1015 aa27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 VDRP11473 427 aa27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 ERCC5P28715 1186 aaPredicted RBP27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 GCNT1Q02742 428 aa27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 NR1H3Q13133 447 aa27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 TPD52L1Q16890 204 aaPredicted RBP27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 DPCR1Q3MIW9 517 aa27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 ALYREFQ86V81 257 aaKnown RBP27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 LINC00597Q9H2U6 94 aa27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 USP3Q9Y6I4 520 aa27.8■■■□□ 2.04
TSPAN4-217ENST00000527644 SLC9A3R1O14745 358 aaPredicted RBP27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 CYP26A1O43174 497 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 TLR5O60602 858 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 PAEPP09466 180 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 SP9P0CG40 484 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 CD19P15391 556 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 PGFP49763 221 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 MRE11P49959 708 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 MTAPQ13126 283 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 TMEM270Q6UE05 265 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 IRF2BP1Q8IU81 584 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 EXOC4Q96A65 974 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 NACA2Q9H009 215 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 INTS2Q9H0H0 1204 aaKnown RBP27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 CFAP97Q9P2B7 532 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 PCDHB4Q9Y5E5 795 aa27.79■■■□□ 2.04
TSPAN4-217ENST00000527644 TRDMT1O14717 391 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 NFATC1O95644 943 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 GJA4P35212 333 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 ZNF528Q3MIS6 628 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 CT47A1Q5JQC4 288 aaPredicted RBP27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 RRAGAQ7L523 313 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 CCDC186Q7Z3E2 898 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 SYNPOQ8N3V7 929 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 GPT2Q8TD30 523 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 KAT5Q92993 513 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 CHFRQ96EP1 664 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 ZFRQ96KR1 1074 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 THAP9Q9H5L6 903 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 CYLDQ9NQC7 956 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 HESX1Q9UBX0 185 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 TSPAN16Q9UKR8 245 aa27.78■■■□□ 2.04
TSPAN4-217ENST00000527644 PSEN1P49768 467 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms