RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 GRSF1Q12849 480 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 SNX30Q5VWJ9 437 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 KRT39Q6A163 491 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 ISM2Q6H9L7 571 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 FILIP1Q7Z7B0 1213 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 KIAA2013Q8IYS2 634 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 ADGRG2Q8IZP9 1017 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CPA6Q8N4T0 437 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 RUBCNQ92622 972 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 TATDN2Q93075 761 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 TIGD1Q96MW7 591 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 SLITRK1Q96PX8 696 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 HNRNPABQ99729 332 aaKnown RBP11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 P2RY13Q9BPV8 354 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 NIF3L1Q9GZT8 377 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CCSER2Q9H7U1 834 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CYP3A43Q9HB55 503 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 RMND1Q9NWS8 449 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 EHD2Q9NZN4 543 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 CFAP97Q9P2B7 532 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 SMG5Q9UPR3 1016 aaKnown RBP11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 ATP8B3O60423 1300 aa11.06□□□□□ -0.64
PRPF40B-204ENST00000527253 RNF40O75150 1001 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 CYP17A1P05093 508 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 MBL2P11226 248 aaPredicted RBP11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 TGM1P22735 817 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 OPRD1P41143 372 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 SLC6A11P48066 632 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 PDE6CP51160 858 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 NRLP54845 237 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 MESP2Q0VG99 397 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 LPAL2Q16609 132 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 CBWD6Q4V339 395 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 CBWD3Q5JTY5 395 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 CBWD5Q5RIA9 395 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 HEATR6Q6AI08 1181 aaKnown RBP11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 RHBDF2Q6PJF5 856 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 CLEC20AQ6ZU45 233 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 SFTPA1Q8IWL2 248 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 OVCA2Q8WZ82 227 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 CD101Q93033 1021 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 ATP2A3Q93084 1043 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 SMARCE1Q969G3 411 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 CYFIP2Q96F07 1278 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 ARID3AQ99856 593 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 NT5C1AQ9BXI3 368 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 COMMD8Q9NX08 183 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 OSER1Q9NX31 292 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 MAN1B1Q9UKM7 699 aa11.05□□□□□ -0.64
PRPF40B-204ENST00000527253 K7EQS6 105 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 GREM1O60565 184 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 SMC2O95347 1197 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 TBX18O95935 607 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 FAM200BP0CF97 657 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 DRD1P21728 446 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 HOXA6P31267 233 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 PXNP49023 591 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 MXI1P50539 228 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 DHCR24Q15392 516 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 HECTD3Q5T447 861 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 PPP1R26Q5T8A7 1209 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 LONP2Q86WA8 852 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 C12orf40Q86WS4 652 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 ELOA2Q8IYF1 753 aaPredicted RBP11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 KIAA1958Q8N8K9 716 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 SLC4A11Q8NBS3 891 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 FBXL13Q8NEE6 735 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 PDZD8Q8NEN9 1154 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 JAKMIP2Q96AA8 810 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 CCDC34Q96HJ3 373 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 DUSP9Q99956 384 aaKnown RBP11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 HINFPQ9BQA5 517 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 NMUR1Q9HB89 426 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 CISHQ9NSE2 258 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 RAB20Q9NX57 234 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 MYH10P35580 1976 aa11.04□□□□□ -0.64
PRPF40B-204ENST00000527253 PPP1R3GB7ZBB8 358 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 CYP26A1O43174 497 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 NFATC1O95644 943 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 EPB41P11171 864 aaKnown RBP11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 TUBP50607 506 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 RAD23BP54727 409 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 FKBP3Q00688 224 aaKnown RBP11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 AMPD2Q01433 879 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 DCAF17Q5H9S7 520 aaPredicted RBP11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 SCD5Q86SK9 330 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 WDR5BQ86VZ2 330 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 SLC35C1Q96A29 364 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 RMDN1Q96DB5 314 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 IMPG2Q9BZV3 1241 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 NCDNQ9UBB6 729 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 SCML2Q9UQR0 700 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 COQ4Q9Y3A0 265 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 MYO16Q9Y6X6 1858 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms