RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 TMCO1Q9UM00 188 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 PCNTO95613 3336 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 HBP1O60381 514 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 GJA5P36382 358 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 SNRPFP62306 86 aaKnown RBP10.29□□□□□ -0.76
USP35-201ENST00000526425 GCNT1Q02742 428 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 CLUL1Q15846 466 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 LRRC36Q1X8D7 754 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 IFNLR1Q8IU57 520 aaPredicted RBP10.29□□□□□ -0.76
USP35-201ENST00000526425 SLC15A3Q8IY34 581 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 TTC30BQ8N4P2 665 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 CYTH2Q99418 400 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 DHX33Q9H6R0 707 aaKnown RBP10.29□□□□□ -0.76
USP35-201ENST00000526425 ARFGEF1Q9Y6D6 1849 aa10.29□□□□□ -0.76
USP35-201ENST00000526425 A0A0B4J269 797 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 TNPO2O14787 897 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 NVLO15381 856 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 CTSHP09668 335 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 STX2P32856 288 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 IFI35P80217 286 aaPredicted RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 NFIL3Q16649 462 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 CELF3Q5SZQ8 465 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 MPZL3Q6UWV2 235 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.28□□□□□ -0.76
USP35-201ENST00000526425 GFM2Q969S9 779 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 OSMRQ99650 979 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 SMYD3Q9H7B4 428 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 GPATCH2LQ9NWQ4 482 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 POLR2AP24928 1970 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 CFAP73A6NFT4 308 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 LACTBL1A8MY62 500 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 H3BRB1 525 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 PEX14O75381 377 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 SPAG7O75391 227 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 VNN1O95497 513 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 GSTT2P0CG29 244 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 GSTT2BP0CG30 244 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 PLOD1Q02809 727 aaPredicted RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 CNPY1Q3B7I2 92 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 C11orf63Q6NUN7 778 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 PRR23CQ6ZRP0 262 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 C12orf56Q8IXR9 622 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 PEX5LQ8IYB4 626 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 LRRC34Q8IZ02 419 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 HPDLQ96IR7 371 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 SLC39A3Q9BRY0 314 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 TMEM121Q9BTD3 319 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 SEPT10Q9P0V9 454 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 IP6K2Q9UHH9 426 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 TTLL3Q9Y4R7 772 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 BTNL10A8MVZ5 291 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 XPOTO43592 962 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 CALB1P05937 261 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 ZBTB48P10074 688 aaPredicted RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 HSPA9P38646 679 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 PEX5P50542 639 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 TMEM132DQ14C87 1099 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 ACAP1Q15027 740 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 JADE1Q6IE81 842 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 DPY19L2P1Q6NXN4 242 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 DENND1BQ6P3S1 775 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 DARS2Q6PI48 645 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 SLC2A7Q6PXP3 512 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 MFSD7Q6UXD7 560 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 ACOT1Q86TX2 421 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 KIAA0319LQ8IZA0 1049 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 HSPBAP1Q96EW2 488 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 ACAP3Q96P50 834 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 XPO6Q96QU8 1125 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 GPR20Q99678 358 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 CCT7Q99832 543 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 MED10Q9BTT4 135 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 STMN4Q9H169 189 aaPredicted RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 TJP2Q9UDY2 1190 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
USP35-201ENST00000526425 PCDHA3Q9Y5H8 950 aa10.28□□□□□ -0.76
USP35-201ENST00000526425 EXOC1LA0A1B0GW35 172 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 HTR3EA5X5Y0 456 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 PROSCO94903 275 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 C4BPAP04003 597 aaKnown RBP10.27□□□□□ -0.76
USP35-201ENST00000526425 EDN1P05305 212 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 TCF4P15884 667 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 AKAP5P24588 427 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 HALP42357 657 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 BRSK2Q8IWQ3 736 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 PALM2Q8IXS6 379 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 SDR16C5Q8N3Y7 309 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 LRRC8CQ8TDW0 803 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 PCYT2Q99447 389 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 HAPLN2Q9GZV7 340 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 MINDY3Q9H8M7 445 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.27□□□□□ -0.76
USP35-201ENST00000526425 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms