RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ASB16Q96NS5 453 aa13.63□□□□□ -0.23
SMPD1-202ENST00000526280 SLC46A2Q9BY10 475 aa13.63□□□□□ -0.23
SMPD1-202ENST00000526280 LHX5Q9H2C1 402 aa13.63□□□□□ -0.23
SMPD1-202ENST00000526280 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
SMPD1-202ENST00000526280 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
SMPD1-202ENST00000526280 LRRC4Q9HBW1 653 aa13.63□□□□□ -0.23
SMPD1-202ENST00000526280 OBSL1O75147 1896 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 AP5Z1O43299 807 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 ZDHHC11BP0C7U3 371 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 PGFP49763 221 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 PDE6CP51160 858 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 TKTL1P51854 596 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 HTR4Q13639 388 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 PM20D1Q6GTS8 502 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 PARM1Q6UWI2 310 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 MTSS1LQ765P7 747 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 CCDC186Q7Z3E2 898 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 NOP9Q86U38 636 aaKnown RBP13.62□□□□□ -0.23
SMPD1-202ENST00000526280 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 WDTC1Q8N5D0 677 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 MAB21L3Q8N8X9 362 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 ZSCAN18Q8TBC5 510 aaPredicted RBP13.62□□□□□ -0.23
SMPD1-202ENST00000526280 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 PPP1R9BQ96SB3 815 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 KCNK12Q9HB15 430 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 GMIPQ9P107 970 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 IGSF9Q9P2J2 1179 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 CYTH4Q9UIA0 394 aa13.62□□□□□ -0.23
SMPD1-202ENST00000526280 NOCTQ9UK39 431 aaKnown RBP13.62□□□□□ -0.23
SMPD1-202ENST00000526280 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 A0A1W2PQJ5 194 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 C2orf78A6NCI8 922 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 ZBED1O96006 694 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 ABL1P00519 1130 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 USP17L7P0C7H9 530 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 PFKLP17858 780 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 FCARP24071 287 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 RGS7P49802 495 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 ADIGQ0VDE8 80 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 CCDC173Q0VFZ6 552 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 TAF3Q5VWG9 929 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 FMNL3Q8IVF7 1028 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 ARID3BQ8IVW6 561 aaPredicted RBP13.61□□□□□ -0.23
SMPD1-202ENST00000526280 CMTM8Q8IZV2 173 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 SCML4Q8N228 414 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 FGF14Q92915 247 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 IQCDQ96DY2 449 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 SLC4A5Q9BY07 1137 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 ULBP1Q9BZM6 244 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 ZFP14Q9HCL3 533 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 TRPC7Q9HCX4 862 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 CYLDQ9NQC7 956 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 TLR8Q9NR97 1041 aaKnown RBP13.61□□□□□ -0.23
SMPD1-202ENST00000526280 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
SMPD1-202ENST00000526280 TRAV19A0A0A6YYK7 116 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 A0A1W2PQH9 124 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 LRRC53A6NM62 1247 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 ECI2O75521 394 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 OAS1P00973 400 aaKnown RBP13.6□□□□□ -0.23
SMPD1-202ENST00000526280 ASGR2P07307 311 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 MMEP08473 750 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CCDC172P0C7W6 258 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 LCP1P13796 627 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 FERP16591 822 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CHRNB2P17787 502 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 HDCP19113 662 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CDH5P33151 784 aaPredicted RBP13.6□□□□□ -0.23
SMPD1-202ENST00000526280 AVPR1AP37288 418 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 ACADSBP45954 432 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 PSEN1P49768 467 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 TUBP50607 506 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CDR2Q01850 454 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 ARID5AQ03989 594 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 SPECC1LQ69YQ0 1117 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 TANGO2Q6ICL3 276 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 BHLHA9Q7RTU4 235 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 IRF2BP2Q7Z5L9 587 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 SCD5Q86SK9 330 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 TMEM110Q86TL2 294 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 SIX6OS1Q8N1H7 587 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 ARL14EPQ8N8R7 260 aaPredicted RBP13.6□□□□□ -0.23
SMPD1-202ENST00000526280 ST13P5Q8NFI4 369 aaPredicted RBP13.6□□□□□ -0.23
SMPD1-202ENST00000526280 SLC20A1Q8WUM9 679 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 RSAD2Q8WXG1 361 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 ELSPBP1Q96BH3 223 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 SLC22A12Q96S37 553 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CYP2S1Q96SQ9 504 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 RPP25Q9BUL9 199 aaKnown RBP13.6□□□□□ -0.23
SMPD1-202ENST00000526280 TRIM5Q9C035 493 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 RNF38Q9H0F5 515 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 PDCL3Q9H2J4 239 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 NMUR1Q9HB89 426 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CNGB3Q9NQW8 809 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 OSER1Q9NX31 292 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms