RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 PRR25Q96S07 402 aa6.62□□□□□ -1.35
COPB1-204ENST00000526191 C17orf80Q9BSJ5 609 aa6.62□□□□□ -1.35
COPB1-204ENST00000526191 THAP7Q9BT49 309 aaPredicted RBP6.62□□□□□ -1.35
COPB1-204ENST00000526191 DPCDQ9BVM2 203 aaPredicted RBP6.62□□□□□ -1.35
COPB1-204ENST00000526191 ZSCAN32Q9NX65 697 aa6.62□□□□□ -1.35
COPB1-204ENST00000526191 G3BP2Q9UN86 482 aaKnown RBP6.62□□□□□ -1.35
COPB1-204ENST00000526191 RICTORQ6R327 1708 aa6.62□□□□□ -1.35
COPB1-204ENST00000526191 ABCA9Q8IUA7 1624 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 PRRT4C9JH25 899 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 AP4M1O00189 453 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 EXOC3O60645 756 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 PRR35P0CG20 571 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 MTX3Q5HYI7 312 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 L1TD1Q5T7N2 865 aaKnown RBP6.61□□□□□ -1.35
COPB1-204ENST00000526191 LRCH2Q5VUJ6 765 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 PAPD7Q5XG87 772 aaKnown RBP6.61□□□□□ -1.35
COPB1-204ENST00000526191 FCRL6Q6DN72 434 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 KIRREL2Q6UWL6 708 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 KCTD20Q7Z5Y7 419 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 PNLDC1Q8NA58 520 aaKnown RBP6.61□□□□□ -1.35
COPB1-204ENST00000526191 DNAJB14Q8TBM8 379 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 A1CFQ9NQ94 594 aaKnown RBP6.61□□□□□ -1.35
COPB1-204ENST00000526191 ZNF70Q9UC06 446 aaPredicted RBP6.61□□□□□ -1.35
COPB1-204ENST00000526191 PREX1Q8TCU6 1659 aa6.61□□□□□ -1.35
COPB1-204ENST00000526191 ARHGEF40Q8TER5 1519 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 RAPGEF2Q9Y4G8 1499 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 YEATS2Q9ULM3 1422 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 TRIM43BA6NCK2 446 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 TSPAN6O43657 245 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 BRAFP15056 766 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 C3orf38Q5JPI3 329 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 ZNF626Q68DY1 528 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 C1QL2Q7Z5L3 287 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 SPARTQ8N0X7 666 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 SPSB4Q96A44 273 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
COPB1-204ENST00000526191 DAZAP1Q96EP5 407 aaKnown RBP6.6□□□□□ -1.35
COPB1-204ENST00000526191 SUCLG2Q96I99 432 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 C1QTNF7Q9BXJ2 289 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 QTRT1Q9BXR0 403 aaKnown RBP6.6□□□□□ -1.35
COPB1-204ENST00000526191 CDY1Q9Y6F8 540 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 ATP10BO94823 1461 aa6.6□□□□□ -1.35
COPB1-204ENST00000526191 PYCARD-AS1I3L0S3 204 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 MARCH6O60337 910 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 SRGAP2O75044 1071 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 PRKCBP05771 671 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 DLDP09622 509 aaKnown RBP6.59□□□□□ -1.35
COPB1-204ENST00000526191 TBC1D25Q3MII6 688 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 RNASE12Q5GAN4 147 aaKnown RBP6.59□□□□□ -1.35
COPB1-204ENST00000526191 CERCAMQ5T4B2 595 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 CACHD1Q5VU97 1274 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 YTHDF3Q7Z739 585 aaKnown RBP6.59□□□□□ -1.35
COPB1-204ENST00000526191 TERB1Q8NA31 727 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 FAM156AQ8NDB6 213 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 SMG7Q92540 1137 aaKnown RBP6.59□□□□□ -1.35
COPB1-204ENST00000526191 RITA1Q96K30 269 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 FAM204AQ9H8W3 233 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 DNMT3BQ9UBC3 853 aaKnown RBP6.59□□□□□ -1.35
COPB1-204ENST00000526191 TPCN1Q9ULQ1 816 aa6.59□□□□□ -1.35
COPB1-204ENST00000526191 ZNF804BA4D1E1 1349 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 MBD3L4A6NDZ8 208 aaPredicted RBP6.58□□□□□ -1.36
COPB1-204ENST00000526191 MBD3L3A6NE82 208 aaPredicted RBP6.58□□□□□ -1.36
COPB1-204ENST00000526191 H7C4K7 107 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 FRS3O43559 492 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 ZKSCAN1P17029 563 aaPredicted RBP6.58□□□□□ -1.36
COPB1-204ENST00000526191 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
COPB1-204ENST00000526191 PSG6Q00889 435 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 CNGA2Q16280 664 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 SUPT20HL1Q3ZLR7 823 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 NMD3Q96D46 503 aaKnown RBP6.58□□□□□ -1.36
COPB1-204ENST00000526191 PPP1R9BQ96SB3 815 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 STK31Q9BXU1 1019 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 CIPCQ9C0C6 399 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 METTL14Q9HCE5 456 aaKnown RBP6.58□□□□□ -1.36
COPB1-204ENST00000526191 XPNPEP3Q9NQH7 507 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 TCEAL9Q9UHQ7 104 aa6.58□□□□□ -1.36
COPB1-204ENST00000526191 VSTM5A8MXK1 200 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 H7C1Q1 480 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 PPP6CO00743 305 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 ADAMTS3O15072 1205 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 RASSF9O75901 435 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 RASAL1O95294 804 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 KELP23276 732 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 KLRC1P26715 233 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 CERS1P27544 350 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 RENBPP51606 427 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 ALDH5A1P51649 535 aaPredicted RBP6.57□□□□□ -1.36
COPB1-204ENST00000526191 ITGA8P53708 1063 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 BCAT1P54687 386 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 RPS16P62249 146 aaKnown RBP6.57□□□□□ -1.36
COPB1-204ENST00000526191 CCNIQ14094 377 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 GRM3Q14832 879 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 RNF220Q5VTB9 566 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 SLC18B1Q6NT16 456 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 CATSPERGQ6ZRH7 1159 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 CCDC149Q6ZUS6 474 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 NEK8Q86SG6 692 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 GLCCI1Q86VQ1 547 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 LRTOMTQ8WZ04 291 aa6.57□□□□□ -1.36
COPB1-204ENST00000526191 TSR2Q969E8 191 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms