RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 ZFPM1Q8IX07 1006 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 TXNDC5Q8NBS9 432 aaKnown RBP6.69□□□□□ -1.34
ATM-208ENST00000525537 RNF169Q8NCN4 708 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 SHCBP1Q8NEM2 672 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 MBD3L2Q8NHZ7 208 aaPredicted RBP6.69□□□□□ -1.34
ATM-208ENST00000525537 KCNN1Q92952 543 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 PPP2R3CQ969Q6 453 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 ZNF512Q96ME7 567 aaPredicted RBP6.69□□□□□ -1.34
ATM-208ENST00000525537 DIRC2Q96SL1 478 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 KRT84Q9NSB2 600 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 KCND3Q9UK17 655 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 CDYLQ9Y232 598 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 CNPY2Q9Y2B0 182 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 RAD54BQ9Y620 910 aa6.69□□□□□ -1.34
ATM-208ENST00000525537 DOK2O60496 412 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 RPP40O75818 363 aaKnown RBP6.68□□□□□ -1.34
ATM-208ENST00000525537 CHRM3P20309 590 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 ABCD3P28288 659 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 PSMC2P35998 433 aaKnown RBP6.68□□□□□ -1.34
ATM-208ENST00000525537 STAT1P42224 750 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 GCLCP48506 637 aaPredicted RBP6.68□□□□□ -1.34
ATM-208ENST00000525537 KCNC1P48547 511 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 CCT4P50991 539 aaKnown RBP6.68□□□□□ -1.34
ATM-208ENST00000525537 RBM5P52756 815 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATM-208ENST00000525537 DLG4P78352 724 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 CSHL1Q14406 222 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 NFIXQ14938 502 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 CSRP2Q16527 193 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 PTCHD3Q3KNS1 767 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 UBXN11Q5T124 520 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 NAA35Q5VZE5 725 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 MCTP2Q6DN12 878 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 DGAT2L7PQ6IED9 249 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 ANO7Q6IWH7 933 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 TAF2Q6P1X5 1199 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 CCDC129Q6ZRS4 1044 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 TMTC3Q6ZXV5 915 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 MED25Q71SY5 747 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 CHD1LQ86WJ1 897 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 ARMC8Q8IUR7 673 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 SPARTQ8N0X7 666 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 DNAJB14Q8TBM8 379 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 POC1BQ8TC44 478 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 TBC1D22AQ8WUA7 517 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 MBD6Q96DN6 1003 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 GPR20Q99678 358 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 MSL2Q9HCI7 577 aa6.68□□□□□ -1.34
ATM-208ENST00000525537 A0A0U1RQG5 324 aaPredicted RBP6.67□□□□□ -1.34
ATM-208ENST00000525537 A0A1W2PRQ8 180 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 SAC3D1A6NKF1 404 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 DRGXA6NNA5 263 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 STX16-NPEPL1H3BU86 382 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 MATN2O00339 956 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 STX16O14662 325 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 SPTLC2O15270 562 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 LARGE1O95461 756 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 TGM1P22735 817 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 GCSHP23434 173 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 MGAT1P26572 445 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 MAGEA10P43363 369 aaPredicted RBP6.67□□□□□ -1.34
ATM-208ENST00000525537 CCR9P51686 369 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 PRKAG1P54619 331 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 ADAM17P78536 824 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 CAP1Q01518 475 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 ZNF844Q08AG5 666 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 GALNT2Q10471 571 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 CCDC184Q52MB2 194 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 MFSD5Q6N075 450 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 FAM111BQ6SJ93 734 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 SLC30A10Q6XR72 485 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 B4GALNT4Q76KP1 1039 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 RASGRP2Q7LDG7 609 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 R3HCC1LQ7Z5L2 792 aaKnown RBP6.67□□□□□ -1.34
ATM-208ENST00000525537 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.67□□□□□ -1.34
ATM-208ENST00000525537 ANKRD23Q86SG2 305 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 TRABD2AQ86V40 505 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 HMGB4Q8WW32 186 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 SIGLEC10Q96LC7 697 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 WDR24Q96S15 920 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 GHITMQ9H3K2 345 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 CXorf36Q9H7Y0 433 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 AGO3Q9H9G7 860 aaKnown RBP6.67□□□□□ -1.34
ATM-208ENST00000525537 SPON1Q9HCB6 807 aa6.67□□□□□ -1.34
ATM-208ENST00000525537 NOL7Q9UMY1 257 aaKnown RBP6.67□□□□□ -1.34
ATM-208ENST00000525537 CCDC195A0A1B0GUA6 201 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 SH3D21A4FU49 640 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 AHCYL1O43865 530 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 ALOX12P18054 663 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 HK1P19367 917 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 KRT20P35900 424 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 ARF3P61204 181 aaPredicted RBP6.66□□□□□ -1.34
ATM-208ENST00000525537 ARF1P84077 181 aaKnown RBP6.66□□□□□ -1.34
ATM-208ENST00000525537 SF3A3Q12874 501 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATM-208ENST00000525537 FHL3Q13643 280 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 GPR68Q15743 365 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 NRN1LQ496H8 165 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 PRR23BQ6ZRT6 265 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 LRRC8DQ7L1W4 858 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 NGEFQ8N5V2 710 aa6.66□□□□□ -1.34
ATM-208ENST00000525537 KTI12Q96EK9 354 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms