RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 RAB6CQ53S08 254 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 CYP4A22Q5TCH4 519 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 RAD9BQ6WBX8 426 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 GAREM2Q75VX8 874 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 CCDC186Q7Z3E2 898 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 GRASPQ7Z6J2 395 aaPredicted RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 DNAJB7Q7Z6W7 309 aaPredicted RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 CPNE8Q86YQ8 564 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 RIN3Q8TB24 985 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 SPPL2BQ8TCT7 592 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 ING5Q8WYH8 240 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 WBP2Q969T9 261 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 PABPC5Q96DU9 382 aaKnown RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 TNIP3Q96KP6 325 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 C8orf48Q96LL4 319 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 ZSWIM3Q96MP5 696 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 ZNF830Q96NB3 372 aaPredicted RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 USB1Q9BQ65 265 aaKnown RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 PACSIN1Q9BY11 444 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 EDEM3Q9BZQ6 932 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 RAB6CQ9H0N0 254 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 KCNF1Q9H3M0 494 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 NMUR1Q9HB89 426 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 ABHD10Q9NUJ1 306 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 SPTLC3Q9NUV7 552 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 IL37Q9NZH6 218 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 GMIPQ9P107 970 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 NUDT5Q9UKK9 219 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 SSX2IPQ9Y2D8 614 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 LUC7L2Q9Y383 392 aaKnown RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 REXO2Q9Y3B8 237 aaKnown RBP6.85□□□□□ -1.31
CD44-214ENST00000525211 GREB1Q4ZG55 1949 aa6.85□□□□□ -1.31
CD44-214ENST00000525211 TCRBV5S1A1TA0A578 114 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 SOWAHDA6NJG2 315 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 TMCO5BA8MYB1 307 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 E5RJQ4 531 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 XPO1O14980 1071 aaKnown RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 MDM4O15151 490 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 PAPSS1O43252 624 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 TBX18O95935 607 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 ABL1P00519 1130 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 FYNP06241 537 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 RHOP08100 348 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 USP17L7P0C7H9 530 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 UNGP13051 313 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 LCP1P13796 627 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 FERP16591 822 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 CEBPBP17676 345 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 KCNA5P22460 613 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 RFX1P22670 979 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 SP100P23497 879 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 CDH5P33151 784 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 RPL34P49207 117 aaKnown RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 MRE11P49959 708 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 KIF11P52732 1056 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 YWHAEP62258 255 aaKnown RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 ZXDBP98169 803 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 KLHL30Q0D2K2 578 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 BST2Q10589 180 aaKnown RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 PLD1Q13393 1074 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 NR6A1Q15406 480 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 CLEC16AQ2KHT3 1053 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 RAB41Q5JT25 222 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 PRSS36Q5K4E3 855 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 PPM1LQ5SGD2 360 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 DESI1Q6ICB0 168 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 PPFIBP1Q86W92 1011 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 OR8K1Q8NGG5 319 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 MAFAQ8NHW3 353 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 SHKBP1Q8TBC3 707 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 SMG7Q92540 1137 aaKnown RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 RSPRY1Q96DX4 576 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 SMARCD1Q96GM5 515 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 FUBP3Q96I24 572 aaKnown RBP eCLIP6.84□□□□□ -1.31
CD44-214ENST00000525211 PDLIM2Q96JY6 352 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 SLC22A12Q96S37 553 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 MYADMQ96S97 322 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 CDCA3Q99618 268 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 CORO1BQ9BR76 489 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 NUP58Q9BVL2 599 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 PRKD2Q9BZL6 878 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 ULBP1Q9BZM6 244 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 TRIM7Q9C029 511 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 MIS12Q9H081 205 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 ADAM7Q9H2U9 754 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 POMKQ9H5K3 350 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 UBE2ZQ9H832 354 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 ABCB6Q9NP58 842 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 DMAP1Q9NPF5 467 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 CALCOCO1Q9P1Z2 691 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 MYO6Q9UM54 1294 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 MAGED2Q9UNF1 606 aaPredicted RBP6.84□□□□□ -1.31
CD44-214ENST00000525211 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.84□□□□□ -1.31
CD44-214ENST00000525211 USP3Q9Y6I4 520 aa6.84□□□□□ -1.31
CD44-214ENST00000525211 PATJQ8NI35 1801 aa6.83□□□□□ -1.32
CD44-214ENST00000525211 A0A1W2PQH9 124 aa6.83□□□□□ -1.32
CD44-214ENST00000525211 A0A1W2PRU2 124 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms