RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FAXDC2Q96IV6 333 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 MED15Q96RN5 788 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 LMBRD1Q9NUN5 540 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 COMMD8Q9NX08 183 aa13.58□□□□□ -0.24
TRAPPC4-205ENST00000525079 CYP26A1O43174 497 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 GNA14O95837 355 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 OLFM2O95897 454 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 PFKLP17858 780 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 NBL1P41271 181 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 GAS6Q14393 721 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 EML3Q32P44 896 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 HECTD3Q5T447 861 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 Q6ZS52 159 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 TRIM59Q8IWR1 403 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 TTC39CQ8N584 583 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 KAT5Q92993 513 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 DUSP16Q9BY84 665 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 CHRDQ9H2X0 955 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 FBXO44Q9H4M3 255 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 ECT2Q9H8V3 914 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 FBRSL1Q9HCM7 1045 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 CFAP97Q9P2B7 532 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 RWDD2AQ9UIY3 292 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 MYO16Q9Y6X6 1858 aa13.57□□□□□ -0.24
TRAPPC4-205ENST00000525079 FAM92AA1XBS5 289 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 TBX18O95935 607 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 CALCAP01258 141 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 AFPP02771 609 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 ZDHHC11BP0C7U3 371 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 CCDC192P0DO97 292 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 IRF1P10914 325 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 CD19P15391 556 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 TCF3P15923 654 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 GJA4P35212 333 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 GALK1P51570 392 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 LRRC32Q14392 662 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 SNX30Q5VWJ9 437 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 FSTL4Q6MZW2 842 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 C1orf228Q6PIY5 440 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 RRAGAQ7L523 313 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 ASCL5Q7RTU5 278 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 ARHGEF19Q8IW93 802 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 UBR7Q8N806 425 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 EHBP1Q8NDI1 1231 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 LMO3Q8TAP4 145 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 ATP2A3Q93084 1043 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 WBP2Q969T9 261 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 NACA2Q9H009 215 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 NMUR1Q9HB89 426 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 TLR8Q9NR97 1041 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 OSER1Q9NX31 292 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 NUDT5Q9UKK9 219 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
TRAPPC4-205ENST00000525079 A0A1W2PQH9 124 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 PROB1E7EW31 1015 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 PMM2O15305 246 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 TLR5O60602 858 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 GFRA3O60609 400 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 FGFR1OPO95684 399 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 TBXAS1P24557 533 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 MARSP56192 900 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 SATB1Q01826 763 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 CETN1Q12798 172 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 GOLGA7BQ2TAP0 167 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 DGKKQ5KSL6 1271 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 ARHGAP17Q68EM7 881 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 CLEC17AQ6ZS10 378 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 TTC30AQ86WT1 665 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 MLKLQ8NB16 471 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 UBA3Q8TBC4 463 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 ZFRQ96KR1 1074 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 CNOT6LQ96LI5 555 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 C2orf42Q9NWW7 574 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 FBXO4Q9UKT5 387 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 SCML2Q9UQR0 700 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 CACNA1IQ9P0X4 2223 aa13.55□□□□□ -0.24
TRAPPC4-205ENST00000525079 RNF225M0QZC1 329 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 TULP2O00295 520 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 MDM4O15151 490 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 P4HA2O15460 535 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 NFATC1O95644 943 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 EGFP01133 1207 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 RARGP13631 454 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 HOXC13P31276 330 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 KIF11P52732 1056 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 AMPD2Q01433 879 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 GRSF1Q12849 480 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 NR1H3Q13133 447 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 CCINQ13939 588 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 TPD52L1Q16890 204 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms