RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 P2RY13Q9BPV8 354 aa19.65■□□□□ 0.74
CAPN1-203ENST00000525013 PSMA7O14818 248 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 SCAMP3O14828 347 aaKnown RBP19.64■□□□□ 0.73
CAPN1-203ENST00000525013 SLC16A3O15427 465 aaKnown RBP19.64■□□□□ 0.73
CAPN1-203ENST00000525013 GADD45BO75293 160 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-203ENST00000525013 NFATC1O95644 943 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 TDGF1P13385 188 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 LRRC63Q05C16 580 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 HECTD3Q5T447 861 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 SUMF1Q8NBK3 374 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 ZMIZ2Q8NF64 920 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 HNRNPABQ99729 332 aaKnown RBP19.64■□□□□ 0.73
CAPN1-203ENST00000525013 COMMD8Q9NX08 183 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 RAB20Q9NX57 234 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 IL37Q9NZH6 218 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 GMIPQ9P107 970 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 CFAP97Q9P2B7 532 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 ARMCX3Q9UH62 379 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-203ENST00000525013 MAN1B1Q9UKM7 699 aa19.64■□□□□ 0.73
CAPN1-203ENST00000525013 SDK1Q7Z5N4 2213 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 COCHO43405 550 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 LILRB5O75023 590 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 CILPO75339 1184 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 OLFM2O95897 454 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 EGFP01133 1207 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 MCCD1P59942 119 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 ZNF394Q53GI3 561 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 NAIF1Q69YI7 327 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 HEATR6Q6AI08 1181 aaKnown RBP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 KLHL10Q6JEL2 608 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 FILIP1Q7Z7B0 1213 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 DDX42Q86XP3 938 aaKnown RBP eCLIP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 ELOA2Q8IYF1 753 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 WHAMMQ8TF30 809 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 RUBCNQ92622 972 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 DHTKD1Q96HY7 919 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 NACA2Q9H009 215 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 FBXO44Q9H4M3 255 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 CCSER2Q9H7U1 834 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 FBRSL1Q9HCM7 1045 aaKnown RBP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 CSNK1G1Q9HCP0 422 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 C2orf42Q9NWW7 574 aa19.63■□□□□ 0.73
CAPN1-203ENST00000525013 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-203ENST00000525013 CHURC1-FNTBB4DL54 471 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 SLC9A3R1O14745 358 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-203ENST00000525013 DRD1P21728 446 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 FNTBP49356 437 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 CLEC20AQ6ZU45 233 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 ZC3H3Q8IXZ2 948 aaKnown RBP19.62■□□□□ 0.73
CAPN1-203ENST00000525013 TTC39CQ8N584 583 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 CD101Q93033 1021 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 TATDN2Q93075 761 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 HEXIM2Q96MH2 286 aaKnown RBP19.62■□□□□ 0.73
CAPN1-203ENST00000525013 NCDNQ9UBB6 729 aa19.62■□□□□ 0.73
CAPN1-203ENST00000525013 SMG5Q9UPR3 1016 aaKnown RBP19.62■□□□□ 0.73
CAPN1-203ENST00000525013 BIN1O00499 593 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 ATG13O75143 517 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 RNF40O75150 1001 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 CD44P16070 742 aaKnown RBP19.61■□□□□ 0.73
CAPN1-203ENST00000525013 DMWDQ09019 674 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 CBWD6Q4V339 395 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 CBWD3Q5JTY5 395 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 CBWD5Q5RIA9 395 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 SNX30Q5VWJ9 437 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 PKN3Q6P5Z2 889 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 DCLK2Q8N568 766 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 ARID3AQ99856 593 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 EPC1Q9H2F5 836 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 TLR8Q9NR97 1041 aaKnown RBP19.61■□□□□ 0.73
CAPN1-203ENST00000525013 CISHQ9NSE2 258 aa19.61■□□□□ 0.73
CAPN1-203ENST00000525013 FAM92AA1XBS5 289 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 K7ESF4 209 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 PAPSS2O95340 614 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-203ENST00000525013 ZDHHC11BP0C7U3 371 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 ACO1P21399 889 aaKnown RBP19.6■□□□□ 0.73
CAPN1-203ENST00000525013 PPP1R2P41236 205 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 TUBP50607 506 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 CCDC40Q4G0X9 1142 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 PPP1R26Q5T8A7 1209 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-203ENST00000525013 GPRIN1Q7Z2K8 1008 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 KIAA2013Q8IYS2 634 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 KIAA1958Q8N8K9 716 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 FAXDC2Q96IV6 333 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 RAB23Q9ULC3 237 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 SH3BP1Q9Y3L3 701 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 CEP250Q9BV73 2442 aa19.6■□□□□ 0.73
CAPN1-203ENST00000525013 RALGAPA1Q6GYQ0 2036 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 SPAG17Q6Q759 2223 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 CYP26A1O43174 497 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 CYP17A1P05093 508 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 IRF1P10914 325 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 PGFP49763 221 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 LPAL2Q16609 132 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 FBXO43Q4G163 708 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 PRR23BQ6ZRT6 265 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 LONP2Q86WA8 852 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 ADGRG2Q8IZP9 1017 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 NELFBQ8WX92 580 aa19.59■□□□□ 0.73
CAPN1-203ENST00000525013 SECISBP2LQ93073 1101 aaKnown RBP19.59■□□□□ 0.73
CAPN1-203ENST00000525013 SLC35C1Q96A29 364 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms