RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 KCNK3O14649 394 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 SLC28A2O43868 658 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 RPP40O75818 363 aaKnown RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 IDH1O75874 414 aaKnown RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 ICAM1P05362 532 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 CLCN4P51793 760 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 POLGP54098 1239 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 EXOSC10Q01780 885 aaKnown RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 FAM102BQ5T8I3 360 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 PARM1Q6UWI2 310 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 SLC30A10Q6XR72 485 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 MTSS1LQ765P7 747 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 KBTBD6Q86V97 674 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 SPATS2Q86XZ4 545 aaKnown RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 PTRH1Q86Y79 214 aaKnown RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 LILRA2Q8N149 483 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 SLC39A11Q8N1S5 342 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 ZBP1Q9H171 429 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 SLC6A20Q9NP91 592 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 SETD4Q9NVD3 440 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 C19orf73Q9NVV2 129 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 DPP7Q9UHL4 492 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 DSEQ9UL01 958 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 APOBEC2Q9Y235 224 aaKnown RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 USP9YO00507 2555 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-203ENST00000524927 TSC2P49815 1807 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 LAMA4Q16363 1823 aa7.94□□□□□ -1.14
NEDD8-203ENST00000524927 ATMQ13315 3056 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 CCDC195A0A1B0GUA6 201 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 ZNF561-AS1K7EIQ3 104 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 APAF1O14727 1248 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 MAFKO60675 156 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 KATNA1O75449 491 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 CAVIN2O95810 425 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 CTSAP10619 480 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 C6P13671 934 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 LSSP48449 732 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 GALK1P51570 392 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 UAP1L1Q3KQV9 507 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 ATP13A4Q4VNC1 1196 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 C12orf60Q5U649 245 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 STEAP3Q658P3 488 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 GPR155Q7Z3F1 870 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 PIP4P1Q86T03 277 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 ZSWIM9Q86XI8 627 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 VPS52Q8N1B4 723 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 ADAMTS14Q8WXS8 1223 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 PHKBQ93100 1093 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 BOCQ9BWV1 1114 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 LMAN1LQ9HAT1 526 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 SMURF1Q9HCE7 757 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 C1orf112Q9NSG2 853 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 KLHL42Q9P2K6 505 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 CLIP2Q9UDT6 1046 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 NUB1Q9Y5A7 615 aa7.93□□□□□ -1.14
NEDD8-203ENST00000524927 MYO5AQ9Y4I1 1855 aaKnown RBP7.93□□□□□ -1.14
NEDD8-203ENST00000524927 GREB1LQ9C091 1923 aaPredicted RBP7.93□□□□□ -1.14
NEDD8-203ENST00000524927 AHCTF1Q8WYP5 2266 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 TCRBV5S4A2TA0A5A2 114 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 CFBP00751 764 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 KRT1P04264 644 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 AMY2AP04746 511 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 RPLP2P05387 115 aaKnown RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 AMY2BP19961 511 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 RARSP54136 660 aaKnown RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 RPS6P62753 249 aaKnown RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 ITKQ08881 620 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 IKQ13123 557 aaPredicted RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 HNRNPDQ14103 355 aaKnown RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 HSDL1Q3SXM5 330 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 CCDC158Q5M9N0 1113 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 TTC39AQ5SRH9 613 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 SLFN13Q68D06 897 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 PDXDC1Q6P996 788 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 LRRC55Q6ZSA7 311 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 GET4Q7L5D6 327 aaPredicted RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 NLRX1Q86UT6 975 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 AMOTL1Q8IY63 956 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 LRRC43Q8N309 656 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 SDR42E1Q8WUS8 393 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 LMBR1Q8WVP7 490 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 SMG7Q92540 1137 aaKnown RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 SPATA33Q96N06 139 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 SLC38A3Q99624 504 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 TMEM117Q9H0C3 514 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 SP110Q9HB58 689 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 ATP6V0A4Q9HBG4 840 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 SPTLC3Q9NUV7 552 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 OXSMQ9NWU1 459 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 PADI3Q9ULW8 664 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 NDRG2Q9UN36 371 aaKnown RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 G3BP2Q9UN86 482 aaKnown RBP7.92□□□□□ -1.14
NEDD8-203ENST00000524927 CTNND2Q9UQB3 1225 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 CDY2AQ9Y6F7 541 aa7.92□□□□□ -1.14
NEDD8-203ENST00000524927 KIAA1217Q5T5P2 1943 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 ZFHX3Q15911 3703 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 BCLAF3A2AJT9 711 aaKnown RBP7.91□□□□□ -1.14
NEDD8-203ENST00000524927 HGSO14964 777 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-203ENST00000524927 INPPL1O15357 1258 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 HIP1RO75146 1068 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms