RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 UBXN10Q96LJ8 280 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 AGAP2Q99490 1192 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 TTPALQ9BTX7 342 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 PTDSS2Q9BVG9 487 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 LPAR3Q9UBY5 353 aa6.78□□□□□ -1.32
SKP1-213ENST00000524288 PRAMEF33A0A0G2JMD5 474 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 AGPSO00116 658 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 IRAK2O43187 625 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 DNPH1O43598 174 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 PRAMEF10O60809 474 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 NCR1O76036 304 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 RHOBTB3O94955 611 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 ARP10275 920 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 CNTFP26441 200 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 CD6P30203 668 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 AKT1P31749 480 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 CXADRP78310 365 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 DYRK1AQ13627 763 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 DEPDC1Q5TB30 811 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 TMPRSS9Q7Z410 1059 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 SLC15A3Q8IY34 581 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 SNX19Q92543 992 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 ZSCAN31Q96LW9 406 aaPredicted RBP6.77□□□□□ -1.33
SKP1-213ENST00000524288 MED15Q96RN5 788 aa6.77□□□□□ -1.33
SKP1-213ENST00000524288 DCLRE1CQ96SD1 692 aaKnown RBP6.77□□□□□ -1.33
SKP1-213ENST00000524288 RGS17Q9UGC6 210 aaPredicted RBP6.77□□□□□ -1.33
SKP1-213ENST00000524288 SRP68Q9UHB9 627 aaKnown RBP6.77□□□□□ -1.33
SKP1-213ENST00000524288 A0A0B4J269 797 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 RRN3P2A6NIE6 340 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 CD3EAPO15446 510 aaKnown RBP6.76□□□□□ -1.33
SKP1-213ENST00000524288 CSF1RP07333 972 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 ITGA2BP08514 1039 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 PDHA1P08559 390 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 PRKAA2P54646 552 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 NSUN2Q08J23 767 aaKnown RBP eCLIP6.76□□□□□ -1.33
SKP1-213ENST00000524288 E2F2Q14209 437 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 PTPAQ15257 358 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 TAF12Q16514 161 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 CYP26C1Q6V0L0 522 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 RFX8Q6ZV50 586 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 MOGAT3Q86VF5 341 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 RASGRP3Q8IV61 690 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 TMEM132CQ8N3T6 1108 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 NACC2Q96BF6 587 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 ZBTB26Q9HCK0 441 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 TMEM8AQ9HCN3 771 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 KCNE5Q9UJ90 142 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 SSX2IPQ9Y2D8 614 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 DTNAQ9Y4J8 743 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 FPGT-TNNI3KV9GXZ4 949 aa6.76□□□□□ -1.33
SKP1-213ENST00000524288 FER1L4A9Z1Z3 1794 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 B9A039 149 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 DIRC3C9JPN6 131 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 J3KTA2 159 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 NCAM2O15394 837 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 CCNT2O60583 730 aaKnown RBP6.75□□□□□ -1.33
SKP1-213ENST00000524288 PPFIA2O75334 1257 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 ACTL6BO94805 426 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 VNN1O95497 513 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 ERBB2P04626 1255 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 SRGNP10124 158 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 NR4A1P22736 598 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 PGDP52209 483 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 PNLIPRP1P54315 467 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 ALDH18A1P54886 795 aaKnown RBP6.75□□□□□ -1.33
SKP1-213ENST00000524288 ARL4CP56559 192 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 CYP2A13Q16696 494 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 BTBD16Q32M84 506 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 KRTAP5-3Q6L8H2 238 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 RRAGAQ7L523 313 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 CCDC117Q8IWD4 279 aaPredicted RBP6.75□□□□□ -1.33
SKP1-213ENST00000524288 SCAMP5Q8TAC9 235 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 PROKR1Q8TCW9 393 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 ZG16BQ96DA0 208 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 ALOXE3Q9BYJ1 711 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 FAM83DQ9H4H8 585 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 DNAJB11Q9UBS4 358 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 HERC5Q9UII4 1024 aaKnown RBP6.75□□□□□ -1.33
SKP1-213ENST00000524288 SNX14Q9Y5W7 946 aa6.75□□□□□ -1.33
SKP1-213ENST00000524288 LRRFIP2Q9Y608 721 aaKnown RBP6.75□□□□□ -1.33
SKP1-213ENST00000524288 A0A1W2PS29 197 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 GAGE12HA6NDE8 117 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 MYADML2A6NDP7 307 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 ADM5C9JUS6 153 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 E7ENX8 843 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 SOAT2O75908 522 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 CFIP05156 583 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 POLBP06746 335 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 JUPP14923 745 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 LAG3P18627 525 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 GATA3P23771 443 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 BCAT1P54687 386 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 NANOS3P60323 173 aaKnown RBP6.74□□□□□ -1.33
SKP1-213ENST00000524288 RPS7P62081 194 aaKnown RBP6.74□□□□□ -1.33
SKP1-213ENST00000524288 TAP2Q03519 686 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 LMOD3Q0VAK6 560 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 RESTQ13127 1097 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms