RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
SPARC-206ENST00000524277 TM4SF5O14894 197 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 MAPK13O15264 365 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 CAVIN2O95810 425 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 HOXC13P31276 330 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 DPP6P42658 865 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 ENPEPQ07075 957 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 STK4Q13043 487 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 SF3A2Q15428 464 aaKnown RBP12.56□□□□□ -0.4
SPARC-206ENST00000524277 CRY1Q16526 586 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 C2orf27AQ580R0 203 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 EOGTQ5NDL2 527 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 STPG1Q5TH74 334 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 BTBD8Q5XKL5 378 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 NAIF1Q69YI7 327 aaPredicted RBP12.56□□□□□ -0.4
SPARC-206ENST00000524277 RHBDF2Q6PJF5 856 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 TRMT11Q7Z4G4 463 aaKnown RBP12.56□□□□□ -0.4
SPARC-206ENST00000524277 FAM35AQ86V20 835 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 PAGE5Q96GU1 130 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 CNTNAP3BQ96NU0 1288 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 CNTNAP3Q9BZ76 1288 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 POLMQ9NP87 494 aaPredicted RBP12.56□□□□□ -0.4
SPARC-206ENST00000524277 CFAP97Q9P2B7 532 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 FRMD4BQ9Y2L6 1034 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 SH3BP1Q9Y3L3 701 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 PTPRDP23468 1912 aa12.56□□□□□ -0.4
SPARC-206ENST00000524277 CACNA1BQ00975 2339 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CLDN5O00501 218 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 TNFRSF10BO14763 440 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CALUO43852 315 aaPredicted RBP12.55□□□□□ -0.4
SPARC-206ENST00000524277 KLRC4O43908 158 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CLSTN1O94985 981 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 KAT7O95251 611 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 ZDHHC11BP0C7U3 371 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 ADH5P11766 374 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CMA1P23946 247 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CASP1P29466 404 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 GBP1P32455 592 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 SLC5A3P53794 718 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CACNA2D1P54289 1103 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CDH8P55286 799 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CREB5Q02930 508 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 GOLGA8FQ08AF8 430 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 GOLGA8DPQ0D2H9 430 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 GAB4Q2WGN9 574 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 ZACNQ401N2 412 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 SPDYCQ5MJ68 293 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
SPARC-206ENST00000524277 PMS2CLQ68D20 193 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 RNF43Q68DV7 783 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
SPARC-206ENST00000524277 LSM14BQ9BX40 385 aaKnown RBP12.55□□□□□ -0.4
SPARC-206ENST00000524277 IMPG2Q9BZV3 1241 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 KCTD10Q9H3F6 313 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 SMYD3Q9H7B4 428 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 ARHGEF4Q9NR80 690 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 TMEM30AQ9NV96 361 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 SMPD4Q9NXE4 827 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
SPARC-206ENST00000524277 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
SPARC-206ENST00000524277 HOXC11O43248 304 aaPredicted RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 COCHO43405 550 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 ACTN4O43707 911 aaKnown RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 AP1G2O75843 785 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 CASP4P49662 377 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 SEC13P55735 322 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 DNM1Q05193 864 aaKnown RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 NFIL3Q16649 462 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 FOXD4L6Q3SYB3 417 aaPredicted RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 KMT5BQ4FZB7 885 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 LY6G5CQ5SRR4 150 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 DAB2IPQ5VWQ8 1189 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 FOXD4L3Q6VB84 417 aaPredicted RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 KIAA0895Q8NCT3 520 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 PLEKHO2Q8TD55 490 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 FAXDC2Q96IV6 333 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 SPACA7Q96KW9 195 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 NACA2Q9H009 215 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 TLR8Q9NR97 1041 aaKnown RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 POLR3BQ9NW08 1133 aaPredicted RBP12.54□□□□□ -0.4
SPARC-206ENST00000524277 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
SPARC-206ENST00000524277 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
SPARC-206ENST00000524277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.53□□□□□ -0.4
SPARC-206ENST00000524277 KHNYNO15037 678 aaKnown RBP12.53□□□□□ -0.4
SPARC-206ENST00000524277 DCLK1O15075 740 aa12.53□□□□□ -0.4
SPARC-206ENST00000524277 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
SPARC-206ENST00000524277 VNN1O95497 513 aa12.53□□□□□ -0.4
SPARC-206ENST00000524277 ASS1P00966 412 aaKnown RBP12.53□□□□□ -0.4
SPARC-206ENST00000524277 NR3C1P04150 777 aa12.53□□□□□ -0.4
SPARC-206ENST00000524277 RPL13P26373 211 aaKnown RBP12.53□□□□□ -0.4
SPARC-206ENST00000524277 KIR2DL1P43626 348 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms