RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PCNX4Q63HM2 1172 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 METTL7BQ6UX53 244 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 PPP1R21Q6ZMI0 780 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 C15orf39Q6ZRI6 1047 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 BZW1Q7L1Q6 419 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 TMCO2Q7Z6W1 182 aaPredicted RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 NLRX1Q86UT6 975 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 SERINC5Q86VE9 423 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ERICH1Q86X53 443 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 MAP4K3Q8IVH8 894 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 SYCP3Q8IZU3 236 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 BBOF1Q8ND07 529 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 C10orf82Q8WW14 230 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 C1orf54Q8WWF1 131 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ARNTL2Q8WYA1 636 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 PRCCQ92733 491 aaPredicted RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ATP6V0A1Q93050 837 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 KLHL29Q96CT2 875 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 RSRC1Q96IZ7 334 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 MFSD14AQ96MC6 490 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 TMEM237Q96Q45 408 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 RAD9AQ99638 391 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 GPR20Q99678 358 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 SENP7Q9BQF6 1050 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ZNF577Q9BSK1 485 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 PLVAPQ9BX97 442 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 RNPEPQ9H4A4 650 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 PCIF1Q9H4Z3 704 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 TLE6Q9H808 572 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 UBN1Q9NPG3 1134 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 LARSQ9P2J5 1176 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 ZMIZ1Q9ULJ6 1067 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 RPL26L1Q9UNX3 145 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 R3HDM2Q9Y2K5 976 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 STARD13Q9Y3M8 1113 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 UBIAD1Q9Y5Z9 338 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 BDP1A6H8Y1 2624 aa8.22□□□□□ -1.09
SPIDR-223ENST00000524033 MYH9P35579 1960 aaKnown RBP8.22□□□□□ -1.09
SPIDR-223ENST00000524033 TRAFD1O14545 582 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 TREHO43280 583 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 PSTPIP1O43586 416 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ZC3H11AO75152 810 aaKnown RBP eCLIP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 PEX11AO75192 247 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 LGR5O75473 907 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 PROSCO94903 275 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 GAS8O95995 478 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 CYP1A1P04798 512 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 LGALS2P05162 132 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 P4HBP07237 508 aaKnown RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 SMIM10L2AP0DMW4 78 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 SMIM10L2BP0DMW5 78 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 POU3F3P20264 500 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 RRM1P23921 792 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 GBP2P32456 591 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 POLGP54098 1239 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 DEFB103AP81534 67 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 SP4Q02446 784 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 BLMHQ13867 455 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 MBTPS1Q14703 1052 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 CCNG2Q16589 344 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 TCTN1Q2MV58 587 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 NUGGCQ68CJ6 796 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 KRT39Q6A163 491 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 SLC39A4Q6P5W5 647 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 DRICH1Q6PGQ1 229 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 CEP128Q6ZU80 1094 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 MON1BQ7L1V2 547 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ENOSF1Q7L5Y1 443 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 OTUD6AQ7L8S5 288 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 MIER3Q7Z3K6 550 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 HAUS6Q7Z4H7 955 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 TRABD2AQ86V40 505 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 CCDC25Q86WR0 208 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ZNF677Q86XU0 584 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 MCOLN2Q8IZK6 566 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.12e-6■■□□□ 12.5
SPIDR-223ENST00000524033 ZCCHC9Q8N567 271 aaKnown RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ENDOVQ8N8Q3 282 aaKnown RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ANKRD42Q8N9B4 389 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ATL2Q8NHH9 583 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 MGARPQ8TDB4 240 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 PARD3BQ8TEW8 1205 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ATG4AQ8WYN0 398 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 INPP5DQ92835 1189 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 KCNN1Q92952 543 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 WNT8BQ93098 351 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 TBC1D31Q96DN5 1066 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 TRIM11Q96F44 468 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 CDHR1Q96JP9 859 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 FAM81BQ96LP2 452 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 NT5C1BQ96P26 610 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 TGS1Q96RS0 853 aaKnown RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 PHACTR1Q9C0D0 580 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 TXLNGQ9NUQ3 528 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 SETD4Q9NVD3 440 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 THEGQ9P2T0 379 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 ASIC3Q9UHC3 531 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 CHORDC1Q9UHD1 332 aaPredicted RBP8.21□□□□□ -1.1
SPIDR-223ENST00000524033 NAALADL1Q9UQQ1 740 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 L3MBTL1Q9Y468 752 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms