RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 SPAG5Q96R06 1193 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 ULBP1Q9BZM6 244 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 OSER1Q9NX31 292 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 EHD2Q9NZN4 543 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 CCL26Q9Y258 94 aa13.52□□□□□ -0.25
VEGFA-224ENST00000523873 TECTAO75443 2155 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 A0A1W2PQH9 124 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 FAM92AA1XBS5 289 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 HEPACAM2A8MVW5 462 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 MED7O43513 233 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 SETSIPP0DME0 302 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 CYP11B1P15538 503 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 SOX5P35711 763 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 SLC8A3P57103 927 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 STILQ15468 1287 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 RAB41Q5JT25 222 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 VITQ6UXI7 678 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 MTSS1LQ765P7 747 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 SCD5Q86SK9 330 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 NOP9Q86U38 636 aaKnown RBP13.51□□□□□ -0.25
VEGFA-224ENST00000523873 TTC16Q8NEE8 873 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 SLC20A1Q8WUM9 679 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 USP13Q92995 863 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-224ENST00000523873 LRRC3BQ96PB8 259 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 UBXN6Q9BZV1 441 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 XPO4Q9C0E2 1151 aaKnown RBP13.51□□□□□ -0.25
VEGFA-224ENST00000523873 RNF38Q9H0F5 515 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 FBXO44Q9H4M3 255 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 EPHX3Q9H6B9 360 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 CCSER2Q9H7U1 834 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 LRRC4Q9HBW1 653 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 ZFP14Q9HCL3 533 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 PNPLA8Q9NP80 782 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 COMMD8Q9NX08 183 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 IGSF9Q9P2J2 1179 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 TJP2Q9UDY2 1190 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 NUDT5Q9UKK9 219 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 SCML2Q9UQR0 700 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 USP3Q9Y6I4 520 aa13.51□□□□□ -0.25
VEGFA-224ENST00000523873 TRAV19A0A0A6YYK7 116 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 DCXO43602 365 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 ECI2O75521 394 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 OAS1P00973 400 aaKnown RBP13.5□□□□□ -0.25
VEGFA-224ENST00000523873 CKMP06732 381 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 MMEP08473 750 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 ZDHHC11BP0C7U3 371 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 DDX6P26196 483 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■□□□ 12.2
VEGFA-224ENST00000523873 PBX1P40424 430 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 STAT1P42224 750 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 GPD2P43304 727 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 ARID5AQ03989 594 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 TDGQ13569 410 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 CACNA2D4Q7Z3S7 1137 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 WDTC1Q8N5D0 677 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 C1orf131Q8NDD1 294 aaKnown RBP13.5□□□□□ -0.25
VEGFA-224ENST00000523873 PDZD8Q8NEN9 1154 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 CLEC4CQ8WTT0 213 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 BAP1Q92560 729 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 ELSPBP1Q96BH3 223 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 TRPV4Q9HBA0 871 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 ST7Q9NRC1 585 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 SMPD4Q9NXE4 827 aa13.5□□□□□ -0.25
VEGFA-224ENST00000523873 A0A1W2PQC6 194 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 DPYSL4O14531 572 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 SCAMP3O14828 347 aaKnown RBP13.49□□□□□ -0.25
VEGFA-224ENST00000523873 MDM4O15151 490 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 AP5Z1O43299 807 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 COCHO43405 550 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 TBX18O95935 607 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 MBL2P11226 248 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-224ENST00000523873 HDCP19113 662 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 AVPR1AP37288 418 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 PPP3CCP48454 512 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 PDE6CP51160 858 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 GPC5P78333 572 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 ZXDAP98168 799 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 ZXDBP98169 803 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 IER5LQ5T953 404 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 BHLHA9Q7RTU4 235 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 CCDC186Q7Z3E2 898 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 SIX6OS1Q8N1H7 587 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 EPS8L1Q8TE68 723 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 KCTD13Q8WZ19 329 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 OVCA2Q8WZ82 227 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 DDX1Q92499 740 aaKnown RBP13.49□□□□□ -0.25
VEGFA-224ENST00000523873 ZFYVE19Q96K21 471 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 MIS12Q9H081 205 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 TLR8Q9NR97 1041 aaKnown RBP13.49□□□□□ -0.25
VEGFA-224ENST00000523873 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
VEGFA-224ENST00000523873 PCDHGC3Q9UN70 934 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 DUSP12Q9UNI6 340 aa13.49□□□□□ -0.25
VEGFA-224ENST00000523873 LRRC53A6NM62 1247 aa13.48□□□□□ -0.25
VEGFA-224ENST00000523873 PI4K2BG5E9Z4 385 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms