RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 CCDC130P13994 396 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 MARCH8Q5T0T0 291 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
TNIP1-218ENST00000523338 POLNQ7Z5Q5 900 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 CCDC110Q8TBZ0 833 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 FAM172AQ8WUF8 416 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 KCNN1Q92952 543 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 FAF2Q96CS3 445 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 TMEM237Q96Q45 408 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 NT5C1AQ9BXI3 368 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.11□□□□□ -0.31
TNIP1-218ENST00000523338 KLHL14Q9P2G3 628 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 DCTN4Q9UJW0 460 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 SLC12A4Q9UP95 1085 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 ARL2BPQ9Y2Y0 163 aa13.11□□□□□ -0.31
TNIP1-218ENST00000523338 ASB14A6NK59 587 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 APRTP07741 180 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 VDRP11473 427 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.312e-8■■□□□ 13.1
TNIP1-218ENST00000523338 SMPD1P17405 629 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 LMO2P25791 158 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 RBL1P28749 1068 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 EPHX2P34913 555 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 SLC26A2P50443 739 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 ZNF143P52747 638 aaPredicted RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 GEMIN4P57678 1058 aaKnown RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 RBP5P82980 135 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 ROR1Q01973 937 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 SEPT7Q16181 437 aaKnown RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 CTAGE3PQ8IX95 158 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 PDIK1LQ8N165 341 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 MCRS1Q96EZ8 462 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 KCNH4Q9UQ05 1017 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 SHOC2Q9UQ13 582 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 L3MBTL1Q9Y468 752 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 OTOFQ9HC10 1997 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 C2CD4BA6NLJ0 364 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 GABBR2O75899 941 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 ASMTLO95671 621 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 SNAI1O95863 264 aaPredicted RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 OAS1P00973 400 aaKnown RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 APOC2P02655 101 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 P4HA1P13674 534 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 ZNF200P98182 395 aaPredicted RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 SNCBQ16143 134 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 ZNF484Q5JVG2 852 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 ZNF449Q6P9G9 518 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 PPP1R21Q6ZMI0 780 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 CYP4V2Q6ZWL3 525 aaPredicted RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 PRPF39Q86UA1 669 aaKnown RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 CMASQ8NFW8 434 aaPredicted RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 KLHL29Q96CT2 875 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 CEP41Q9BYV8 373 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 TMPRSS4Q9NRS4 437 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 PSMC3IPQ9P2W1 217 aaPredicted RBP13.1□□□□□ -0.31
TNIP1-218ENST00000523338 MFHAS1Q9Y4C4 1052 aa13.1□□□□□ -0.31
TNIP1-218ENST00000523338 ANK1P16157 1881 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
TNIP1-218ENST00000523338 IGFBP6P24592 240 aaPredicted RBP13.09□□□□□ -0.31
TNIP1-218ENST00000523338 MSH2P43246 934 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 INHBEP58166 350 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 NCALDP61601 193 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 SNAPC2Q13487 334 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 KBTBD12Q3ZCT8 623 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 RELL1Q8IUW5 271 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 AGGF1Q8N302 714 aaeCLIP13.09□□□□□ -0.318e-10■□□□□ 11.1
TNIP1-218ENST00000523338 TCP10LQ8TDR4 215 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 LRRC8CQ8TDW0 803 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 CNPY3Q9BT09 278 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 TRIM6Q9C030 488 aaPredicted RBP13.09□□□□□ -0.31
TNIP1-218ENST00000523338 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 LAMA3Q16787 3333 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 KLHL33A6NCF5 533 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 A8MXQ7 604 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 NEFHP12036 1026 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 TNFAIP2Q03169 654 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 XRCC4Q13426 336 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 SPARCL1Q14515 664 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 MTFR1Q15390 333 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 PYROXD2Q8N2H3 581 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
TNIP1-218ENST00000523338 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
TNIP1-218ENST00000523338 MYO18AQ92614 2054 aaKnown RBP13.08□□□□□ -0.31
TNIP1-218ENST00000523338 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
TNIP1-218ENST00000523338 UGT1A9O60656 530 aa13.08□□□□□ -0.32
TNIP1-218ENST00000523338 KRT16P08779 473 aa13.08□□□□□ -0.32
TNIP1-218ENST00000523338 ABHD2P08910 425 aa13.08□□□□□ -0.32
TNIP1-218ENST00000523338 IL4RP24394 825 aa13.08□□□□□ -0.32
TNIP1-218ENST00000523338 TARSP26639 723 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms