RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 SIX5Q8N196 739 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 TIPINQ9BVW5 301 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 RPAP1Q9BWH6 1393 aaPredicted RBP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 GSAPA4D1B5 854 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 AGPAT1Q99943 283 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 MAPRE3Q9UPY8 281 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 KATNA1O75449 491 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 HIST1H2ABP04908 130 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 FAM200BP0CF97 657 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 FDFT1P37268 417 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 HIST3H2AQ7L7L0 130 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 HIST1H2ACQ93077 130 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 UGT2B28Q9BY64 529 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 POLR3FQ9H1D9 316 aaPredicted RBP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 ASNSP08243 561 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 IL2P60568 153 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 GRSF1Q12849 480 aaKnown RBP eCLIP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 KCNV1Q6PIU1 500 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 TFB1MQ8WVM0 346 aaKnown RBP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 NMRK2Q9NPI5 230 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 CYLDQ9NQC7 956 aa12.8□□□□□ -0.36
EXTL3-214ENST00000523271 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 AGO2Q9UKV8 859 aaKnown RBP12.8□□□□□ -0.36
EXTL3-214ENST00000523271 KMOO15229 486 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 RBMXL2O75526 392 aaKnown RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 UBE2SQ16763 222 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 PRKAG3Q9UGI9 489 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 FEM1BQ9UK73 627 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SKAP2O75563 359 aaPredicted RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 A1BGP04217 495 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 ZMYM1Q5SVZ6 1142 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 GATAD2AQ86YP4 633 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SLC22A9Q8IVM8 553 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 EMILIN2Q9BXX0 1053 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 EHD3Q9NZN3 535 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 LOC100653049A0A140TA62 436 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SH2B2O14492 632 aaPredicted RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 AREL1O15033 823 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 HLA-DQA2P01906 255 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 PCNAP12004 261 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 B3GALNT2Q8NCR0 500 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 IPMKQ8NFU5 416 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 ZNF341Q9BYN7 854 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 RBM7Q9Y580 266 aaKnown RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 NCK2O43639 380 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SEMA3DO95025 777 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 PRKAR1AP10644 381 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 CACNB2Q08289 660 aaPredicted RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 ITGADQ13349 1161 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 ARHGAP15Q53QZ3 475 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 MFSD14CQ5VZR4 134 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 PPIL6Q8IXY8 311 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 ZNF512Q96ME7 567 aaPredicted RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 PPP1R10Q96QC0 940 aaKnown RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SENP2Q9HC62 589 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 MYRFQ9Y2G1 1151 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 RNASEH1O60930 286 aaKnown RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 NR3C2P08235 984 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 TGM2P21980 687 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 CNTFP26441 200 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 BAG6P46379 1132 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 QPRTQ15274 297 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 GDF11O95390 407 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 PTGER2P43116 358 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 VBP1P61758 197 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 NFIAQ12857 509 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 BIKQ13323 160 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 EPB41L4AQ9HCS5 686 aaPredicted RBP12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SLC38A7Q9NVC3 462 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 MCM8Q9UJA3 840 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 A0A1W2PQC6 194 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SLC16A4O15374 487 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 PDE8BO95263 885 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 NPY2RP49146 381 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SPIRE1Q08AE8 756 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 CYB5D1Q6P9G0 228 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 SMYD1Q8NB12 490 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 MAGEB18Q96M61 343 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
EXTL3-214ENST00000523271 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 NR5A2O00482 541 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 GLRA3O75311 464 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 RPS6KA3P51812 740 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 ILF2Q12905 390 aaKnown RBP12.78□□□□□ -0.36
EXTL3-214ENST00000523271 PHACTR4Q8IZ21 702 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 MYO1HQ8N1T3 1032 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 MCUBQ9NWR8 336 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
EXTL3-214ENST00000523271 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms