RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SLC5A3P53794 718 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 FKBP3Q00688 224 aaKnown RBP11.54□□□□□ -0.56
PVT1-216ENST00000523068 STIM1Q13586 685 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 HECTD3Q5T447 861 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 FSTL4Q6MZW2 842 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 LONP2Q86WA8 852 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 FBXL13Q8NEE6 735 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 SLC2A14Q8TDB8 520 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 CHFRQ96EP1 664 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 RNF38Q9H0F5 515 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 FAM124BQ9H5Z6 455 aaPredicted RBP11.54□□□□□ -0.56
PVT1-216ENST00000523068 FAM49BQ9NUQ9 324 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 IL37Q9NZH6 218 aa11.54□□□□□ -0.56
PVT1-216ENST00000523068 RIF1Q5UIP0 2472 aaKnown RBP11.54□□□□□ -0.56
PVT1-216ENST00000523068 PTPRZ1P23471 2315 aaPredicted RBP11.53□□□□□ -0.56
PVT1-216ENST00000523068 FRYLO94915 3013 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 FAM92AA1XBS5 289 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 CHURC1-FNTBB4DL54 471 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 K7ESF4 209 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 SLC16A3O15427 465 aaKnown RBP11.53□□□□□ -0.56
PVT1-216ENST00000523068 RNF40O75150 1001 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 EGFP01133 1207 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 PPP1R2P41236 205 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 MXI1P50539 228 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 MAP3K7CLP57077 242 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 ZXDBP98169 803 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 LRRC63Q05C16 580 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 ORC1Q13415 861 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 TCERG1LQ5VWI1 586 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 ELOA2Q8IYF1 753 aaPredicted RBP11.53□□□□□ -0.56
PVT1-216ENST00000523068 KIAA2013Q8IYS2 634 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 C12orf29Q8N999 325 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 SCAMP5Q8TAC9 235 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 SPATA20Q8TB22 786 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 CYFIP2Q96F07 1278 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 HNRNPABQ99729 332 aaKnown RBP11.53□□□□□ -0.56
PVT1-216ENST00000523068 SMOQ99835 787 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 LINC00597Q9H2U6 94 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 APOBEC3GQ9HC16 384 aaKnown RBP11.53□□□□□ -0.56
PVT1-216ENST00000523068 PNPLA8Q9NP80 782 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.562e-7■■■■■ 61.4
PVT1-216ENST00000523068 TLR8Q9NR97 1041 aaKnown RBP11.53□□□□□ -0.56
PVT1-216ENST00000523068 RAB20Q9NX57 234 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 SMPD4Q9NXE4 827 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 TBC1D14Q9P2M4 693 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 HMGXB4Q9UGU5 601 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 CHORDC1Q9UHD1 332 aaPredicted RBP11.53□□□□□ -0.56
PVT1-216ENST00000523068 GMEB2Q9UKD1 530 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 SLC8A2Q9UPR5 921 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
PVT1-216ENST00000523068 EML5Q05BV3 1969 aa11.52□□□□□ -0.56
PVT1-216ENST00000523068 MYOFQ9NZM1 2061 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 CCDC163A0A0D9SF12 145 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 E2F8A0AVK6 867 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 COCHO43405 550 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 CILPO75339 1184 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 BEST1O76090 585 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 ZDHHC11BP0C7U3 371 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 CD58P19256 250 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 ADORA2BP29275 332 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 ID4P47928 161 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 FNTBP49356 437 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 SIM2Q14190 667 aaPredicted RBP11.52□□□□□ -0.57
PVT1-216ENST00000523068 LAIR1Q6GTX8 287 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 PRR23BQ6ZRT6 265 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 FILIP1Q7Z7B0 1213 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 ADGRG2Q8IZP9 1017 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 CAMKK1Q8N5S9 505 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 ZMIZ2Q8NF64 920 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 ACDQ96AP0 544 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 OTUB2Q96DC9 234 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 EEF2KMTQ96G04 330 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 NACA2Q9H009 215 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 LMBRD1Q9NUN5 540 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 CFAP97Q9P2B7 532 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
PVT1-216ENST00000523068 ZNF292O60281 2723 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 PSMA7O14818 248 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 ADH1CP00326 375 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 CYP17A1P05093 508 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 UBE2HP62256 183 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 GOLGA8FQ08AF8 430 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 GOLGA8DPQ0D2H9 430 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 KLHL40Q2TBA0 621 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 DCAF17Q5H9S7 520 aaPredicted RBP11.51□□□□□ -0.57
PVT1-216ENST00000523068 HEATR6Q6AI08 1181 aaKnown RBP11.51□□□□□ -0.57
PVT1-216ENST00000523068 ANKRD40Q6AI12 368 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 CLEC20AQ6ZU45 233 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 WDR5BQ86VZ2 330 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 ZC3H3Q8IXZ2 948 aaKnown RBP11.51□□□□□ -0.57
PVT1-216ENST00000523068 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 RPLP0P6Q8NHW5 317 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 DHTKD1Q96HY7 919 aaPredicted RBP11.51□□□□□ -0.57
PVT1-216ENST00000523068 TWNKQ96RR1 684 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 DUSP9Q99956 384 aaKnown RBP11.51□□□□□ -0.57
PVT1-216ENST00000523068 DUSP16Q9BY84 665 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 CCSER2Q9H7U1 834 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 FBRSL1Q9HCM7 1045 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms