RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 RSPRY1Q96DX4 576 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 FAXDC2Q96IV6 333 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 TMEM8AQ9HCN3 771 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 PLEKHM1Q9Y4G2 1056 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 PCDHGA9Q9Y5G4 932 aaKnown RBP3.38□□□□□ -1.87
PCM1-217ENST00000522998 PCDHGA8Q9Y5G5 932 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 PCDHGA7Q9Y5G6 932 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 PCDHGA6Q9Y5G7 932 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 PCDHGA3Q9Y5H0 932 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 PCDHA1Q9Y5I3 950 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 SNX14Q9Y5W7 946 aa3.38□□□□□ -1.87
PCM1-217ENST00000522998 ACOT8O14734 319 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 SLC16A6O15403 523 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 FGF2P09038 288 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 FGF3P11487 239 aaPredicted RBP3.37□□□□□ -1.87
PCM1-217ENST00000522998 CNGA1P29973 690 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 GKP32189 559 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 HK3P52790 923 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 YPEL5P62699 121 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 HSF1Q00613 529 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 STIM1Q13586 685 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 MLC1Q15049 377 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 PRTGQ2VWP7 1150 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 CC2D1BQ5T0F9 858 aaKnown RBP3.37□□□□□ -1.87
PCM1-217ENST00000522998 VSTM1Q6UX27 236 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 B4GALNT4Q76KP1 1039 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 CBARPQ8N350 705 aaPredicted RBP3.37□□□□□ -1.87
PCM1-217ENST00000522998 MAFAQ8NHW3 353 aaPredicted RBP3.37□□□□□ -1.87
PCM1-217ENST00000522998 HS6ST2Q96MM7 605 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 LMBRD1Q9NUN5 540 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 LPAR3Q9UBY5 353 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 MRFAP1Q9Y605 127 aa3.37□□□□□ -1.87
PCM1-217ENST00000522998 NTN3O00634 580 aaPredicted RBP3.36□□□□□ -1.87
PCM1-217ENST00000522998 PMPCBO75439 489 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 TYRP14679 529 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 IL6STP40189 918 aaPredicted RBP3.36□□□□□ -1.87
PCM1-217ENST00000522998 PGGT1BP53609 377 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 B4GALNT1Q00973 533 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 KRT17Q04695 432 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 KCNB1Q14721 858 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 RNF187Q5TA31 235 aaPredicted RBP3.36□□□□□ -1.87
PCM1-217ENST00000522998 DENND2CQ68D51 928 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 PDXDC1Q6P996 788 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 PTCHD4Q6ZW05 846 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 ZNF329Q86UD4 541 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 ZNF280BQ86YH2 543 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 LINC01465Q8N7H1 131 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 ATP2A3Q93084 1043 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 BRINP2Q9C0B6 783 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 PUS7LQ9H0K6 701 aaKnown RBP3.36□□□□□ -1.87
PCM1-217ENST00000522998 SPC25Q9HBM1 224 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 SNX15Q9NRS6 342 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 XPR1Q9UBH6 696 aa3.36□□□□□ -1.87
PCM1-217ENST00000522998 TTBK1Q5TCY1 1321 aaPredicted RBP3.36□□□□□ -1.87
PCM1-217ENST00000522998 GRID2O43424 1007 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 CAMTA2O94983 1202 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 HDCP19113 662 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 DIO1P49895 249 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 DGKEP52429 567 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 ADKP55263 362 aaKnown RBP3.35□□□□□ -1.87
PCM1-217ENST00000522998 NFATC4Q14934 902 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 EMC10Q5UCC4 262 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 FBXL14Q8N1E6 418 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 BRIX1Q8TDN6 353 aaKnown RBP3.35□□□□□ -1.87
PCM1-217ENST00000522998 WFIKKN2Q8TEU8 576 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 NUDCD2Q8WVJ2 157 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 FAM167AQ96KS9 214 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 C17orf80Q9BSJ5 609 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 ARHGAP39Q9C0H5 1083 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 PHLDB1Q86UU1 1377 aa3.35□□□□□ -1.87
PCM1-217ENST00000522998 LINC01565O15544 149 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 CTIFO43310 598 aaKnown RBP3.34□□□□□ -1.87
PCM1-217ENST00000522998 FTLP02792 175 aaPredicted RBP3.34□□□□□ -1.87
PCM1-217ENST00000522998 MYBL2P10244 700 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 CYP2C9P11712 490 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 KCNA3P22001 575 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 TACR3P29371 465 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 PRKAG1P54619 331 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 SOX8P57073 446 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 ZIK1Q3SY52 487 aaPredicted RBP3.34□□□□□ -1.87
PCM1-217ENST00000522998 MGAT5BQ3V5L5 792 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 RFX8Q6ZV50 586 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 RAB11FIP4Q86YS3 637 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 SPATA2LQ8IUW3 424 aaPredicted RBP3.34□□□□□ -1.87
PCM1-217ENST00000522998 WIPF2Q8TF74 440 aaPredicted RBP3.34□□□□□ -1.87
PCM1-217ENST00000522998 TMEM171Q8WVE6 324 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 MED30Q96HR3 178 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 SLITRK1Q96PX8 696 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 NTPCRQ9BSD7 190 aaKnown RBP3.34□□□□□ -1.87
PCM1-217ENST00000522998 PNPOQ9NVS9 261 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 SLC5A4Q9NY91 659 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 TMX2Q9Y320 296 aa3.34□□□□□ -1.87
PCM1-217ENST00000522998 NOTCH3Q9UM47 2321 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 A0A087WYN8 130 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 ANKRD62A6NC57 917 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 M0R3H8 397 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 TNFRSF13BO14836 293 aaPredicted RBP3.33□□□□□ -1.88
PCM1-217ENST00000522998 CD63P08962 238 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 ATF7P17544 494 aaPredicted RBP3.33□□□□□ -1.88
PCM1-217ENST00000522998 ARRB2P32121 409 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms