RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 PLXND1Q9Y4D7 1925 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 UBE4BO95155 1302 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 BCLAF3A2AJT9 711 aaKnown RBP16.39■□□□□ 0.21
MRPS28-209ENST00000522987 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
MRPS28-209ENST00000522987 GIPC1O14908 333 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 COCHO43405 550 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 FOXD2O60548 495 aaPredicted RBP16.39■□□□□ 0.21
MRPS28-209ENST00000522987 CCDC130P13994 396 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 YWHAQP27348 245 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 DHPSP49366 369 aaPredicted RBP16.39■□□□□ 0.21
MRPS28-209ENST00000522987 PKP1Q13835 747 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 LY6G5CQ5SRR4 150 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 RHBDF2Q6PJF5 856 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 ACOT1Q86TX2 421 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 NUP93Q8N1F7 819 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 JAKMIP2Q96AA8 810 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 GMIPQ9P107 970 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 HMGXB4Q9UGU5 601 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 MMP17Q9ULZ9 603 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 PCDHGA5Q9Y5G8 931 aa16.39■□□□□ 0.21
MRPS28-209ENST00000522987 ASCC3Q8N3C0 2202 aaKnown RBP16.39■□□□□ 0.21
MRPS28-209ENST00000522987 C4orf47A7E2U8 309 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 SGK1O00141 431 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 TM4SF5O14894 197 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 KAT7O95251 611 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 OLFM2O95897 454 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 ADH5P11766 374 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 PGFP49763 221 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 LIMK1P53667 647 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 DLG4P78352 724 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 KNOP1Q1ED39 458 aaKnown RBP16.38■□□□□ 0.21
MRPS28-209ENST00000522987 USP39Q53GS9 565 aaKnown RBP16.38■□□□□ 0.21
MRPS28-209ENST00000522987 ZNF667Q5HYK9 610 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 PSAPL1Q6NUJ1 521 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 CNNM4Q6P4Q7 775 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 PAQR9Q6ZVX9 377 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
MRPS28-209ENST00000522987 PNKPQ96T60 521 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 ARHGEF4Q9NR80 690 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 FAM49BQ9NUQ9 324 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 FAM13BQ9NYF5 915 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 EHD2Q9NZN4 543 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 EBF1Q9UH73 591 aa16.38■□□□□ 0.21
MRPS28-209ENST00000522987 TRIM24O15164 1050 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 AP1G2O75843 785 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 BEST1O76090 585 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 KCNK5O95279 499 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 VNN1O95497 513 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 F13A1P00488 732 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 APODP05090 189 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
MRPS28-209ENST00000522987 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
MRPS28-209ENST00000522987 WASP42768 502 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 SLC5A3P53794 718 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 NCOA4Q13772 614 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 CRY1Q16526 586 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 PMS2CLQ68D20 193 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 SPOPLQ6IQ16 392 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 CYP2U1Q7Z449 544 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 PGBD3Q8N328 593 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 DEFB119Q8N690 84 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 IL17RCQ8NAC3 791 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 HMGB4Q8WW32 186 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 DDX1Q92499 740 aaKnown RBP16.37■□□□□ 0.21
MRPS28-209ENST00000522987 PIGKQ92643 395 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 BCCIPQ9P287 314 aaKnown RBP eCLIP16.37■□□□□ 0.21
MRPS28-209ENST00000522987 SH3BP1Q9Y3L3 701 aa16.37■□□□□ 0.21
MRPS28-209ENST00000522987 ATXN2Q99700 1313 aaKnown RBP16.37■□□□□ 0.21
MRPS28-209ENST00000522987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 LNP1A1A4G5 178 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 SLC9A3R1O14745 358 aaPredicted RBP16.36■□□□□ 0.21
MRPS28-209ENST00000522987 KLRC4O43908 158 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 RTN3O95197 1032 aaPredicted RBP16.36■□□□□ 0.21
MRPS28-209ENST00000522987 ADH1CP00326 375 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 PFKLP17858 780 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 ADORA2BP29275 332 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 ATICP31939 592 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 PPP3CCP48454 512 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 DNM1Q05193 864 aaKnown RBP16.36■□□□□ 0.21
MRPS28-209ENST00000522987 STK4Q13043 487 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 BMT2Q1RMZ1 405 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 ANO4Q32M45 955 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 UAP1L1Q3KQV9 507 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 HECTD3Q5T447 861 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 RESP18Q5W5W9 173 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 RASSF3Q86WH2 238 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 BBS7Q8IWZ6 715 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 TMEFF1Q8IYR6 380 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 CEP57L1Q8IYX8 460 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 FUKQ8N0W3 1084 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 KIAA0895Q8NCT3 520 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 PARD3BQ8TEW8 1205 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 ZFRQ96KR1 1074 aaKnown RBP16.36■□□□□ 0.21
MRPS28-209ENST00000522987 CNOT6LQ96LI5 555 aaKnown RBP16.36■□□□□ 0.21
MRPS28-209ENST00000522987 CEP295NLQ96MC4 621 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 LSM14BQ9BX40 385 aaKnown RBP16.36■□□□□ 0.21
MRPS28-209ENST00000522987 NACA2Q9H009 215 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 MAGEF1Q9HAY2 307 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms