RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ITFG1Q8TB96 612 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 GPR152Q8TDT2 470 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 GIPC2Q8TF65 315 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 CPA5Q8WXQ8 436 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 ZNF830Q96NB3 372 aaPredicted RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 MYADMQ96S97 322 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 KCNF1Q9H3M0 494 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 DEF6Q9H4E7 631 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 DMAP1Q9NPF5 467 aaPredicted RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 SPTBN5Q9NRC6 3674 aaKnown RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 SPTLC3Q9NUV7 552 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 HSFX1Q9UBD0 423 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 NENFQ9UMX5 172 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 MRPS23Q9Y3D9 190 aaKnown RBP12.58□□□□□ -0.4
PVT1-215ENST00000522963 CEP83Q9Y592 693 aa12.58□□□□□ -0.4
PVT1-215ENST00000522963 TMCO5BA8MYB1 307 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 TRIM66O15016 1216 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 AKR1B10O60218 316 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 GABBR2O75899 941 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 GJA1P17302 382 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 ATF6P18850 670 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 TUFMP49411 452 aaKnown RBP12.57□□□□□ -0.4
PVT1-215ENST00000522963 RGS7P49802 495 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 SLC8A3P57103 927 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 PDCLQ13371 301 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 VEPH1Q14D04 833 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 SLC18A3Q16572 532 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 CYP4A22Q5TCH4 519 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 ACAD10Q6JQN1 1059 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 PDZD4Q76G19 769 aaPredicted RBP12.57□□□□□ -0.4
PVT1-215ENST00000522963 GPRIN1Q7Z2K8 1008 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 CCDC170Q8IYT3 715 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 STKLD1Q8NE28 680 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 CCDC112Q8NEF3 446 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 CPXM1Q96SM3 734 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 UBXN6Q9BZV1 441 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 EPHX3Q9H6B9 360 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 ASAH2Q9NR71 780 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 TJP2Q9UDY2 1190 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 USTQ9Y2C2 406 aa12.57□□□□□ -0.4
PVT1-215ENST00000522963 TNFRSF10BO14763 440 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 ZNF263O14978 683 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 GZMAP12544 262 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 CYLC1P35663 651 aaPredicted RBP12.56□□□□□ -0.4
PVT1-215ENST00000522963 RPL34P49207 117 aaKnown RBP12.56□□□□□ -0.4
PVT1-215ENST00000522963 RPL10AP62906 217 aaKnown RBP12.56□□□□□ -0.4
PVT1-215ENST00000522963 CENPCQ03188 943 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 SLC5A9Q2M3M2 681 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 PTPN20Q4JDL3 420 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 ALKBH5Q6P6C2 394 aaKnown RBP12.56□□□□□ -0.4
PVT1-215ENST00000522963 STK32AQ8WU08 396 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 KCTD13Q8WZ19 329 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 MCRS1Q96EZ8 462 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 PPP1R13BQ96KQ4 1090 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 SPATA17Q96L03 361 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 HSFY1Q96LI6 401 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 SLC4A5Q9BY07 1137 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.56□□□□□ -0.46e-7■■■■□ 24.2
PVT1-215ENST00000522963 NAGPAQ9UK23 515 aa12.56□□□□□ -0.4
PVT1-215ENST00000522963 MAGED2Q9UNF1 606 aaPredicted RBP12.56□□□□□ -0.4
PVT1-215ENST00000522963 EPN1Q9Y6I3 576 aaPredicted RBP12.56□□□□□ -0.4
PVT1-215ENST00000522963 EIF3CLB5ME19 914 aaKnown RBP12.55□□□□□ -0.4
PVT1-215ENST00000522963 PIK3R2O00459 728 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 ZNF197O14709 1029 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 ARHGAP6O43182 974 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 DCXO43602 365 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 RTN2O75298 545 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 NDUFA10O95299 355 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 PAPLNO95428 1278 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 FTLP02792 175 aaPredicted RBP12.55□□□□□ -0.4
PVT1-215ENST00000522963 ERBB2P04626 1255 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 POU2F2P09086 479 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 CEBPBP17676 345 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 MMP8P22894 467 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 NSFP46459 744 aaKnown RBP12.55□□□□□ -0.4
PVT1-215ENST00000522963 SLC5A3P53794 718 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 PTP4A2Q12974 167 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 MTMR3Q13615 1198 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 RAB41Q5JT25 222 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 MMS22LQ6ZRQ5 1243 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 MON1BQ7L1V2 547 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 DNAJB7Q7Z6W7 309 aaPredicted RBP12.55□□□□□ -0.4
PVT1-215ENST00000522963 TMEM110Q86TL2 294 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 ITIH5Q86UX2 942 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 ERICH1Q86X53 443 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 PHF13Q86YI8 300 aaPredicted RBP12.55□□□□□ -0.4
PVT1-215ENST00000522963 ZDHHC14Q8IZN3 488 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 ACRBPQ8NEB7 543 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 FGF13Q92913 245 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 NOX5Q96PH1 765 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 EIF3CQ99613 913 aaKnown RBP12.55□□□□□ -0.4
PVT1-215ENST00000522963 C11orf70Q9BRQ4 267 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms