RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 HS2ST1Q7LGA3 356 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 CYP2U1Q7Z449 544 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 TRMT11Q7Z4G4 463 aaKnown RBP9.99□□□□□ -0.81
SDC2-207ENST00000522911 KDF1Q8NAX2 398 aaPredicted RBP9.99□□□□□ -0.81
SDC2-207ENST00000522911 GOLGA5Q8TBA6 731 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 SCFD1Q8WVM8 642 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 TCEAL3Q969E4 200 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 FAM84AQ96KN4 292 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 SPACA7Q96KW9 195 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 MRPL45Q9BRJ2 306 aaKnown RBP9.99□□□□□ -0.81
SDC2-207ENST00000522911 SMOC1Q9H4F8 434 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 POLMQ9NP87 494 aaPredicted RBP9.99□□□□□ -0.81
SDC2-207ENST00000522911 PLXND1Q9Y4D7 1925 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 C4orf47A7E2U8 309 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 SPTLC2O15270 562 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 CUTAO60888 179 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 ADAM23O75077 832 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 APODP05090 189 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 ADH5P11766 374 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 HNRNPLP14866 589 aaKnown RBP eCLIP9.98□□□□□ -0.811e-6■■□□□ 12
SDC2-207ENST00000522911 GBP1P32455 592 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 CACNA2D1P54289 1103 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 GAD2Q05329 585 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 MAP7D1Q3KQU3 841 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 C2orf27AQ580R0 203 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 ANO7Q6IWH7 933 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 PSAPL1Q6NUJ1 521 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 SLC23A3Q6PIS1 610 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 LPCAT2Q7L5N7 544 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 RABEPKQ7Z6M1 372 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 SYT12Q8IV01 421 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 SLC9A9Q8IVB4 645 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 ZNF276Q8N554 614 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 PDILTQ8N807 584 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 OR6B3Q8NGW1 331 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 PARD3BQ8TEW8 1205 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 ZNF516Q92618 1163 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 CHAMP1Q96JM3 812 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 TNIP3Q96KP6 325 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 TMEM121BQ9BXQ6 578 aaPredicted RBP9.98□□□□□ -0.81
SDC2-207ENST00000522911 B3GNT5Q9BYG0 378 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 PANK2Q9BZ23 570 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 ZNF518BQ9C0D4 1074 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 CSNK1G1Q9HCP0 422 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 CD248Q9HCU0 757 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 DMAP1Q9NPF5 467 aaPredicted RBP9.98□□□□□ -0.81
SDC2-207ENST00000522911 DMAC2Q9NW81 257 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 CFAP97Q9P2B7 532 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 ATP8B3O60423 1300 aa9.98□□□□□ -0.81
SDC2-207ENST00000522911 FAM208BQ5VWN6 2430 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 A8MXQ7 604 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 SGK1O00141 431 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 COCHO43405 550 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 DLATP10515 647 aaKnown RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 BCKDHBP21953 392 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 NOVA1P51513 510 aaKnown RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 ASIC1P78348 528 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 CEBPZQ03701 1054 aaKnown RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 ENPEPQ07075 957 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 MESP2Q0VG99 397 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 STK38Q15208 465 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 KNOP1Q1ED39 458 aaKnown RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 LY6G5CQ5SRR4 150 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 ATL3Q6DD88 541 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 KLHDC10Q6PID8 442 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 PAQR9Q6ZVX9 377 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 HTR3DQ70Z44 454 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 PIP4P1Q86T03 277 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 CRYBG2Q8N1P7 616 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 ALLCQ8N6M5 410 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 TERB1Q8NA31 727 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 TXNDC5Q8NBS9 432 aaKnown RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 CEP76Q8TAP6 659 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 TAF4BQ92750 862 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 HPS3Q969F9 1004 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 FBXO32Q969P5 355 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 SMARCD1Q96GM5 515 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 ZNF396Q96N95 335 aaPredicted RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 NUSAP1Q9BXS6 441 aaKnown RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 TPSD1Q9BZJ3 242 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 PNPLA8Q9NP80 782 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 ARHGEF4Q9NR80 690 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 SPHK2Q9NRA0 654 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 MARK1Q9P0L2 795 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
SDC2-207ENST00000522911 NUP205Q92621 2012 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 ATG2BQ96BY7 2078 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
SDC2-207ENST00000522911 GFRA2O00451 464 aa9.96□□□□□ -0.82
SDC2-207ENST00000522911 IKBKBO14920 756 aa9.96□□□□□ -0.82
SDC2-207ENST00000522911 CACNG3O60359 315 aa9.96□□□□□ -0.82
SDC2-207ENST00000522911 GREM1O60565 184 aa9.96□□□□□ -0.82
SDC2-207ENST00000522911 KLF8O95600 359 aaPredicted RBP9.96□□□□□ -0.82
SDC2-207ENST00000522911 C4BPAP04003 597 aaKnown RBP9.96□□□□□ -0.82
SDC2-207ENST00000522911 RPN1P04843 607 aaKnown RBP9.96□□□□□ -0.82
SDC2-207ENST00000522911 MBL2P11226 248 aaPredicted RBP9.96□□□□□ -0.82
SDC2-207ENST00000522911 SLC6A11P48066 632 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms