RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CRYGNQ8WXF5 182 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 PGBD4Q96DM1 585 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 CCDC120Q96HB5 630 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 MRGPRX3Q96LB0 322 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 FCRL3Q96P31 734 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-211ENST00000522802 CEP89Q96ST8 783 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 NELL2Q99435 816 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 MAP3K14Q99558 947 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 ZNF577Q9BSK1 485 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 RIC8AQ9NPQ8 531 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 TMEM59LQ9UK28 342 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 SSX2IPQ9Y2D8 614 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 MRPS17Q9Y2R5 130 aaKnown RBP7.05□□□□□ -1.28
VPS13B-211ENST00000522802 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
VPS13B-211ENST00000522802 CNTNAP2Q9UHC6 1331 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 ARL5CA6NH57 179 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 TAF4O00268 1085 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 PDPK1O15530 556 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 ECI2O75521 394 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 CAPNS1P04632 268 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 ZGLP1P0C6A0 271 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 CEBPBP17676 345 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 RPL10P27635 214 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 HOXA11P31270 313 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 GDNFP39905 211 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 NOP2P46087 812 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 NOVA1P51513 510 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 POU4F1Q01851 419 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 PTH1RQ03431 593 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 TARBP2Q15633 366 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 SLC10A6Q3KNW5 377 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 SV2CQ496J9 727 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 MTERF2Q49AM1 385 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 PABPC1LQ4VXU2 614 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 PPM1LQ5SGD2 360 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 LIN9Q5TKA1 542 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 TANGO2Q6ICL3 276 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 POMZP3Q6PJE2 187 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 MRPL10Q7Z7H8 261 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 RHPN2Q8IUC4 686 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 NCOA7Q8NI08 942 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 HASPINQ8TF76 798 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 DNASE1L2Q92874 299 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 GJA10Q969M2 543 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 GAD1Q99259 594 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 LZTS2Q9BRK4 669 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 G6PC3Q9BUM1 346 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 LSM14BQ9BX40 385 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 EIF2AQ9BY44 585 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 ARRDC1-AS1Q9H2J1 176 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 MINDY3Q9H8M7 445 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 IFT122Q9HBG6 1241 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 RBM12Q9NTZ6 932 aaKnown RBP7.04□□□□□ -1.28
VPS13B-211ENST00000522802 FNIP2Q9P278 1114 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 TCEAL9Q9UHQ7 104 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 CTNND2Q9UQB3 1225 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 HES2Q9Y543 173 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 PCDHA10Q9Y5I2 948 aa7.04□□□□□ -1.28
VPS13B-211ENST00000522802 KIF26AQ9ULI4 1882 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 IGKV6-21A0A0C4DH24 114 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 TMEM8BA6NDV4 472 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 SH2B2O14492 632 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 CHMP2AO43633 222 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 PRC1O43663 620 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 FOXD2O60548 495 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 EPN2O95208 641 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 STBD1O95210 358 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 C1RP00736 705 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 ITGAVP06756 1048 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 HNRNPA1P09651 372 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 CHRNB1P11230 501 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 ENDOUP21128 410 aaKnown RBP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 HOXA9P31269 272 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 CXCL12P48061 93 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 USP41Q3LFD5 358 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 PRR16Q569H4 304 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 JAKMIP3Q5VZ66 844 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 CEP68Q76N32 757 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 ZNF410Q86VK4 478 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 LONP2Q86WA8 852 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 TRIM59Q8IWR1 403 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 FAM3CQ92520 227 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 LENG9Q96B70 501 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 ZNF669Q96BR6 464 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 MCRS1Q96EZ8 462 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 CLSTN3Q9BQT9 956 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 PAAF1Q9BRP4 392 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 IER2Q9BTL4 223 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 APOL6Q9BWW8 343 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 LGR4Q9BXB1 951 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 LMAN1LQ9HAT1 526 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 MIOSQ9NXC5 875 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 SUCLA2Q9P2R7 463 aaPredicted RBP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 DNMT3BQ9UBC3 853 aaKnown RBP7.03□□□□□ -1.28
VPS13B-211ENST00000522802 RNF114Q9Y508 228 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 IPPQ9Y573 584 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 PIAS3Q9Y6X2 628 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms