RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CLCN4P51793 760 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 STILQ15468 1287 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 MCOLN2Q8IZK6 566 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.33
PABPC1-219ENST00000522387 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 C18orf8Q96DM3 657 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.02□□□□□ -0.33
PABPC1-219ENST00000522387 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 FNIP2Q9P278 1114 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
PABPC1-219ENST00000522387 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 IRAK3Q9Y616 596 aa13.02□□□□□ -0.33
PABPC1-219ENST00000522387 XPO1O14980 1071 aaKnown RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 CCL16O15467 120 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 KIF5CO60282 957 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 MMP8P22894 467 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 ANXA13P27216 316 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 MON1BQ7L1V2 547 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 SIX6OS1Q8N1H7 587 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 EMC1Q8N766 993 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 SPPL2BQ8TCT7 592 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 FAM149B1Q96BN6 582 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 ISCUQ9H1K1 167 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 GOLPH3Q9H4A6 298 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 CNOT8Q9UFF9 292 aaKnown RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 SSX2IPQ9Y2D8 614 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 PLXNA3P51805 1871 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 PTPRDP23468 1912 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 HHLA1C9JL84 531 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 FSCN2O14926 492 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 PAPSS1O43252 624 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 LSM8O95777 96 aaKnown RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 C8AP07357 584 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 HAPLN1P10915 354 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 GZMAP12544 262 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 ALDH1A3P47895 512 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 RPL7AP62424 266 aaKnown RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 TAF12Q16514 161 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 H2AFVQ71UI9 128 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 PPM1EQ8WY54 764 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 CTNNBL1Q8WYA6 563 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 FUBP3Q96I24 572 aaKnown RBP eCLIP13.01□□□□□ -0.33
PABPC1-219ENST00000522387 ULBP1Q9BZM6 244 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 CSNK1G1Q9HCP0 422 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 ARFGAP3Q9NP61 516 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 YIPF1Q9Y548 306 aa13.01□□□□□ -0.33
PABPC1-219ENST00000522387 LINC01565O15544 149 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 SETSIPP0DME0 302 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 OAS2P29728 719 aaKnown RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 KRT83P78385 493 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 PTP4A2Q12974 167 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 ADGRE1Q14246 886 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 CCDC85BQ15834 202 aaPredicted RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 FAM102AQ5T9C2 384 aaPredicted RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 TRIM72Q6ZMU5 477 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 DENND5BQ6ZUT9 1274 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 HFE2Q6ZVN8 426 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 XYLT1Q86Y38 959 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 IPO4Q8TEX9 1081 aaKnown RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 HCFC1R1Q9NWW0 138 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 STK39Q9UEW8 545 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 HYOU1Q9Y4L1 999 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 INSL5Q9Y5Q6 135 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 ATP8B3O60423 1300 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 LCA5LO95447 670 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 CDH5P33151 784 aaPredicted RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 LIN9Q5TKA1 542 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 TPGS2Q68CL5 300 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 SLC35G2Q8TBE7 412 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 EDEM1Q92611 657 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 MRPL38Q96DV4 380 aaKnown RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 MCEEQ96PE7 176 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 METTL5Q9NRN9 209 aaKnown RBP13□□□□□ -0.33
PABPC1-219ENST00000522387 CTTNBP2NLQ9P2B4 639 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 COG5Q9UP83 839 aa13□□□□□ -0.33
PABPC1-219ENST00000522387 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-219ENST00000522387 SYNJ2BP-COX16A0A087WUM0 186 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 ANKRD62A6NC57 917 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 YJEFN3A6XGL0 299 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 E7ENQ6 273 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 TRIM66O15016 1216 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 VAV2P52735 878 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 LILRA6Q6PI73 481 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 VSTM1Q6UX27 236 aa12.99□□□□□ -0.33
PABPC1-219ENST00000522387 TMC5Q6UXY8 1006 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms