RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SLIT1O75093 1534 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 GTPBP10A4D1E9 387 aaKnown RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 CBX4O00257 560 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 SGO1Q5FBB7 561 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 PPM1LQ5SGD2 360 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 PHACTR4Q8IZ21 702 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ZNF557Q8N988 423 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 SMARCD1Q96GM5 515 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 PPP1R36Q96LQ0 422 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ADAM33Q9BZ11 813 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 EPN3Q9H201 632 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ZNF556Q9HAH1 456 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 DDX4Q9NQI0 724 aaKnown RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 CSDE1O75534 798 aaKnown RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ADCYAP1R1P41586 468 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ANXA11P50995 505 aaKnown RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 CNTN2Q02246 1040 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 RGMBQ6NW40 437 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 SETD3Q86TU7 594 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ENGASEQ8NFI3 743 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ATXN3LQ9H3M9 355 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 WDR41Q9HAD4 459 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 GID8Q9NWU2 228 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 KRT87PA6NCN2 255 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 GOLGA8TH3BQL2 631 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 CHN1P15882 459 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 CTCFP49711 727 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ZDHHC17Q8IUH5 632 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 ABTB1Q969K4 478 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 COPS7BQ9H9Q2 264 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 DMAP1Q9NPF5 467 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 KLHL2O95198 593 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 YWHAQP27348 245 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 FIGNQ5HY92 759 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 SLC5A5Q92911 643 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 KCNK16Q96T55 309 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 LRRC40Q9H9A6 602 aa16.81■□□□□ 0.28
PCDHA3-201ENST00000522353 SPATA31D1Q6ZQQ2 1576 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 SDR42E2A6NKP2 422 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 TIMM44O43615 452 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 KCNK10P57789 538 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 LRRC6Q86X45 466 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 MYO1HQ8N1T3 1032 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 CCDC126Q96EE4 140 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 MSRAQ9UJ68 235 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 RAD51CO43502 376 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 FKBP9O95302 570 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 WEE1P30291 646 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 RAD23BP54727 409 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 NCALDP61601 193 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 SKOR1P84550 965 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 CENPPQ6IPU0 288 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 FKBP9P1Q75LS8 142 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 DSG4Q86SJ6 1040 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 SLC20A1Q8WUM9 679 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 PLEKHA8Q96JA3 519 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 SERPINB11Q96P15 392 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 FAM167BQ9BTA0 163 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 USP15Q9Y4E8 981 aaPredicted RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 RAP1GAPP47736 663 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 TBX4P57082 545 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 PARP9Q8IXQ6 854 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 NUP93Q8N1F7 819 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 RXFP2Q8WXD0 754 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 OLFM3Q96PB7 478 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 RBBP8Q99708 897 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 ISCUQ9H1K1 167 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 CHORDC1Q9UHD1 332 aaPredicted RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 USP18Q9UMW8 372 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 DTNAQ9Y4J8 743 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 CAND2O75155 1236 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 C15orf52Q6ZUT6 534 aaKnown RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 DENND5BQ6ZUT9 1274 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 FAM9CQ8IZT9 166 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 MMGT1Q8N4V1 131 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 POP1Q99575 1024 aaKnown RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 SENP6Q9GZR1 1112 aaPredicted RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 UTP6Q9NYH9 597 aaKnown RBP16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 NRCAMQ92823 1304 aa16.8■□□□□ 0.28
PCDHA3-201ENST00000522353 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 HNRNPRO43390 633 aaKnown RBP16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 ENDOD1O94919 500 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 LGALS2P05162 132 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 AKAP5P24588 427 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 SOAT1P35610 550 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 KDSRQ06136 332 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TMED1Q13445 227 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 CATSPERGQ6ZRH7 1159 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TMEM199Q8N511 208 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 NDEL1Q9GZM8 345 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 IL17RBQ9NRM6 502 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TIMM13Q9Y5L4 95 aaPredicted RBP16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 A0A087X0T9 212 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 FKTNO75072 461 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms