RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	WDR24	Q96S15	920 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	DCLRE1C	Q96SD1	692 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	MNT	Q99583	582 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	GPR20	Q99678	358 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TTPAL	Q9BTX7	342 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	BRD8	Q9H0E9	1235 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NDUFAF4	Q9P032	175 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RNF181	Q9P0P0	153 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PI4KB	Q9UBF8	816 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NFU1	Q9UMS0	254 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ZFR2	Q9UPR6	939 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	USP22	Q9UPT9	525 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CNTN6	Q9UQ52	1028 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	COL15A1	P39059	1388 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PRAMEF33	A0A0G2JMD5	474 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	GOLGA6L6	A8MZA4	724 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052		F5H697	171 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ZNF185	O15231	689 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TRIAP1	O43715	76 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PRAMEF10	O60809	474 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ERN1	O75460	977 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RBL1	P28749	1068 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CD6	P30203	668 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NTSR1	P30989	418 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RAP1GAP	P47736	663 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NPTX2	P47972	431 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	MCM2	P49736	904 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PDE6C	P51160	858 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NR1H2	P55055	460 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ADAM17	P78536	824 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	HHEX	Q03014	270 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CSHL1	Q14406	222 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RPS6KA2	Q15349	733 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SMAD1	Q15797	465 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RBM20	Q5T481	1227 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ICE2	Q659A1	982 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	DSTYK	Q6XUX3	929 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	MICALCL	Q6ZW33	695 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	FAM109A	Q8N4B1	249 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SUN3	Q8TAQ9	357 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CPT1B	Q92523	772 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	HVCN1	Q96D96	273 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ZBTB45	Q96K62	511 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	OSBPL9	Q96SU4	736 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CHODL	Q9H9P2	273 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	UNKL	Q9H9P5	680 aa	Known RBP	5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NOD2	Q9HC29	1040 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	BLOC1S4	Q9NUP1	217 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	KCNE5	Q9UJ90	142 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SSX2IP	Q9Y2D8	614 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CHST2	Q9Y4C5	530 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RPS6KL1	Q9Y6S9	549 aa		5.7	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CAPN14	A8MX76	684 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	AGPS	O00116	658 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RPP40	O75818	363 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	KRT38	O76015	456 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TBX18	O95935	607 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	LMNA	P02545	664 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TFRC	P02786	760 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CNP	P09543	421 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	EPHA3	P29320	983 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SERPINA4	P29622	427 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	GATM	P50440	423 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RPS7	P62081	194 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	FPGS	Q05932	587 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CLCA4	Q14CN2	919 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PREPL	Q4J6C6	727 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PDCD4	Q53EL6	469 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CFAP161	Q6P656	301 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SPOCD1	Q6ZMY3	1216 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	C4orf50	Q6ZRC1	276 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	LRRC55	Q6ZSA7	311 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TRABD2A	Q86V40	505 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SGMS1	Q86VZ5	419 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	MAPKAPK5	Q8IW41	473 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ADGRG5	Q8IZF4	528 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052		Q8N3U1	123 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SNX19	Q92543	992 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ZBTB10	Q96DT7	871 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RRP36	Q96EU6	259 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NEUROD6	Q96NK8	337 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	GPR87	Q9BY21	358 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	KRTAP9-2	Q9BYQ4	174 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PREB	Q9HCU5	417 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PPP4R1L	Q9P1A2	415 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	SERTAD3	Q9UJW9	196 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	DERA	Q9Y315	318 aa		5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RRP7A	Q9Y3A4	280 aa	Known RBP	5.69	□□□□□ -1.5
CTNNA1-233	ENST00000522052	DYTN	A2CJ06	578 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	MYADML2	A6NDP7	307 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	NPEPPSL1	A6NEC2	478 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	FOXS1	O43638	330 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CBFA2T3	O75081	653 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ZFPL1	O95159	310 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	LARGE1	O95461	756 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	DDX58	O95786	925 aa	Known RBP	5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CER1	O95813	267 aa		5.68	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ELANE	P08246	267 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms