RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 CCDC134Q9H6E4 229 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 DDX56Q9NY93 547 aaKnown RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 ZFP69BQ9UJL9 534 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 STRIP2Q9ULQ0 834 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 MED7O43513 233 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 OAS1P00973 400 aaKnown RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 EIF4BP23588 611 aaKnown RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 RABGGTBP53611 331 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 MCL1Q07820 350 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 CA9Q16790 459 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 SLC5A9Q2M3M2 681 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 GOLGA7BQ2TAP0 167 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 FAM183BPQ6ZVS7 135 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 NLRP9Q7RTR0 991 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 PRPF39Q86UA1 669 aaKnown RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 FAM149B1Q96BN6 582 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 ATXN7L3BQ96GX2 97 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 KLK14Q9P0G3 267 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 LGALS13Q9UHV8 139 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 MCM3APO60318 1980 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 FAM189A1O60320 539 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 LSM8O95777 96 aaKnown RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 LCP1P13796 627 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 RBL1P28749 1068 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 PPP2R5DQ14738 602 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 LONP2Q86WA8 852 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 DRAXINQ8NBI3 349 aaPredicted RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 OR6B3Q8NGW1 331 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 CLEC4CQ8WTT0 213 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 DHX35Q9H5Z1 703 aaKnown RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 RABGEF1Q9UJ41 708 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 ADAMTS5Q9UNA0 930 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 SHOC2Q9UQ13 582 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 CCDC78A2IDD5 438 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 SIGLEC16A6NMB1 481 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 ACKR2O00590 384 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 ENTPD5O75356 428 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 ATG7O95352 703 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 PIGRP01833 764 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 GSTA1P08263 222 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 BCAR1P56945 870 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 MROH9Q5TGP6 573 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 ZCCHC23Q6ZST2 131 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 TTC7BQ86TV6 843 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 SLC35B2Q8TB61 432 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 AFG1LQ8WV93 481 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 LAMA3Q16787 3333 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 TCRBV9S1A1TA0A576 114 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 ZBTB42B2RXF5 422 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 TRIM49D1C9J1S8 452 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 ALOX15BO15296 676 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 ITGAVP06756 1048 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 GMPRP36959 345 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 TMEM132DQ14C87 1099 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 TSHZ1Q6ZSZ6 1077 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 TTC8Q8TAM2 541 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 FAM172AQ8WUF8 416 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 DCPSQ96C86 337 aaKnown RBP12.68□□□□□ -0.38
DENND3-217ENST00000521835 SERAC1Q96JX3 654 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 PCMTD2Q9NV79 361 aa12.68□□□□□ -0.38
DENND3-217ENST00000521835 CFAP73A6NFT4 308 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 CYB561D2O14569 222 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 PYGLP06737 847 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 ATP2A2P16615 1042 aaKnown RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 ARF4P18085 180 aaPredicted RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 GRIA1P42261 906 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 DPYSL3Q14195 570 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 CELF3Q5SZQ8 465 aaKnown RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 TRNP1Q6NT89 227 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 UNC5BQ8IZJ1 945 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 DTX3LQ8TDB6 740 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 FAM167AQ96KS9 214 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 C12orf42Q96LP6 360 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 RGS17Q9UGC6 210 aaPredicted RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 ZNF112Q9UJU3 913 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 MFHAS1Q9Y4C4 1052 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 USH1CQ9Y6N9 552 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 UNC5CO95185 931 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 TROVE2P10155 538 aaKnown RBP eCLIP12.67□□□□□ -0.38
DENND3-217ENST00000521835 PLEKHG4Q58EX7 1191 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 GBP7Q8N8V2 638 aaPredicted RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 NKD2Q969F2 451 aaPredicted RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 ACAP3Q96P50 834 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 CACNG4Q9UBN1 327 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 HEY2Q9UBP5 337 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 G3BP2Q9UN86 482 aaKnown RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 POLR2AP24928 1970 aaKnown RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 C3orf70A6NLC5 250 aaPredicted RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 EDF1O60869 148 aaKnown RBP12.67□□□□□ -0.38
DENND3-217ENST00000521835 GPD1P21695 349 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 AKAP5P24588 427 aa12.67□□□□□ -0.38
DENND3-217ENST00000521835 SERPINB3P29508 390 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms