RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SGO2Q562F6 1265 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 XKR4Q5GH76 650 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 TMEM63BQ5T3F8 832 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 AGBL2Q5U5Z8 902 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 JADE1Q6IE81 842 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 TAF2Q6P1X5 1199 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 C17orf99Q6UX52 265 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 ARCQ7LC44 396 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 TLK2Q86UE8 772 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 HOOK3Q86VS8 718 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 UNC93AQ86WB7 457 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 ERICH1Q86X53 443 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 ZDHHC17Q8IUH5 632 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 RELL1Q8IUW5 271 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 CEP120Q8N960 986 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 ATL2Q8NHH9 583 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 IPO4Q8TEX9 1081 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 PIK3R5Q8WYR1 880 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 ART4Q93070 314 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 HHIPL1Q96JK4 782 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 SNX27Q96L92 541 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 DCLK3Q9C098 648 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 PABPC3Q9H361 631 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 GRHL1Q9NZI5 618 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 CNTN3Q9P232 1028 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 FAM153AQ9UHL3 310 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 MKL2Q9ULH7 1088 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 BARX2Q9UMQ3 279 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 UBQLN1Q9UMX0 589 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 NR2E1Q9Y466 385 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 MGAMO43451 1857 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 CASP8AP2Q9UKL3 1982 aa7.06□□□□□ -1.28
CTNNA1-228ENST00000521640 GOLGB1Q14789 3259 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZNF487B1APH4 448 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 H0YGN5 161 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 M0R082 166 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 O00370 1275 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 MEFVO15553 781 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 TJP3O95049 919 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 VTNP04004 478 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 IVLP07476 585 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 GJB1P08034 283 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 RARGP13631 454 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 AKR1A1P14550 325 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 KCNE1P15382 129 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 DESP17661 470 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 PAX3P23760 479 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 HOXA11P31270 313 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 PCK1P35558 622 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 CRYBB1P53674 252 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 HUNKP57058 714 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 MLLT1Q03111 559 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 CALCOCO2Q13137 446 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 TAF1CQ15572 869 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 TAZQ16635 292 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 HADHQ16836 314 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 WDR72Q3MJ13 1102 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 GJC2Q5T442 439 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 CST9Q5W186 159 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ARHGAP17Q68EM7 881 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 RGMBQ6NW40 437 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 TTC27Q6P3X3 843 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 DCUN1D2Q6PH85 259 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 LCLAT1Q6UWP7 414 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZDHHC24Q6UX98 284 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ALKAL1Q6UXT8 129 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 KDM7AQ6ZMT4 941 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 C20orf204Q6ZNR8 217 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 FAM43BQ6ZT52 329 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 TRMT10CQ7L0Y3 403 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZNF771Q7L3S4 317 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 RPAINQ86UA6 219 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 CCDC105Q8IYK2 499 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZDHHC14Q8IZN3 488 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 MICALL1Q8N3F8 863 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 WDTC1Q8N5D0 677 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 CCDC89Q8N998 374 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 SLC4A11Q8NBS3 891 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 BEST2Q8NFU1 509 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZNF417Q8TAU3 575 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 TFAP2BQ92481 460 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 KAT2BQ92831 832 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 NKD2Q969F2 451 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 C18orf8Q96DM3 657 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 MCRS1Q96EZ8 462 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 HPDLQ96IR7 371 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ATP6V1G3Q96LB4 118 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZNF560Q96MR9 790 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 SCLT1Q96NL6 688 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZNF587Q96SQ5 575 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 NT5C1AQ9BXI3 368 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 CELF4Q9BZC1 486 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 OSBPL8Q9BZF1 889 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 AP5M1Q9H0R1 490 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 STMN4Q9H169 189 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 TMBIM4Q9HC24 238 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 ZFYVE28Q9HCC9 887 aa7.05□□□□□ -1.28
CTNNA1-228ENST00000521640 C11orf16Q9NQ32 467 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms